Luedin, Samuel M.; Pothier, Joël F.; Danza, Francesco; Storelli, Nicola; Frigaard, Niels-Ulrik; Wittwer, Matthias; Tonolla, Mauro,

2018.

Complete genome sequence of “Thiodictyon syntrophicum” sp. nov. strain Cad16T, a photolithoautotrophic purple sulfur bacterium isolated from the alpine meromictic Lake Cadagno.

Standards in Genomic Sciences.

13(14).

Verfügbar unter: https://doi.org/10.1186/s40793-018-0317-z

Pillonetto, Marcelo; Arend, Lavinia N.; Faoro, Helisson; D'Espindula, Helena R. S.; Blom, Jochen; Smits, Theo H. M.; Mira, Marcelo T.; Rezzonico, Fabio,

2018.

Emended description of the genus phytobacter, its type species phytobacter diazotrophicus (Zhang 2008) and description of phytobacter ursingii sp. nov.

International Journal of Systematic and Evolutionary Microbiology.

68, S. 176-184.

Verfügbar unter: https://doi.org/10.1099/ijsem.0.002477

Gétaz, Michael; Krijger, Marjon; Rezzonico, Fabio; Smits, Theo; van der Wolf, Jan M.; Pothier, Joël F.,

2018.

Genome-based population structure analysis of the strawberry plant pathogen Xanthomonas fragariae reveals two distinct groups that evolved independently before its species description.

Microbial Genomics.

4(7).

Verfügbar unter: https://doi.org/10.1099/mgen.0.000189

Gétaz, Michael; Baeyen, Steve; Blom, Jochen; Maes, Martine; Cottyn, Bart; Pothier, Joël F.,

2018.

High-quality draft genome sequences of five xanthomonas arboricola pv. fragariae isolates.

Genome Announcements.

6(7).

Verfügbar unter: https://doi.org/10.1128/genomeA.01585-17

Smits, Theo; Duffy, Brion; Sundin, George; Zhao, Youfu; Rezzonico, Fabio,

2017.

Erwinia amylovora in the genomics era : from genomes to pathogen virulence, regulation, and disease control strategies.

Journal of Plant Pathology.

99(Special issue), S. 7-23.

Verfügbar unter: https://doi.org/10.4454/jpp.v99i0.3917

Rezzonico, Fabio; Duffy, Brion; Smits, Theo H.M.; Pothier, Joël F.,

2017.

Erwinia species identification using matrix-assisted laser desorption ionization-time of flight mass spectrometry.

Journal of Plant Pathology.

99(Special issue), S. 121-129.

Verfügbar unter: https://doi.org/10.4454/jpp.v99i0.3916

Ishimaru, Carol; Lansdell, Teresa A.; Clardy, Jon; Duffy, Brion; Smits, Theo H.M.,

2017.

The histidine-reversible antibiotic herbicolin O produced by Pantoea vagans C9-1 is pantocin A.

Journal of Plant Pathology.

99(Special issue), S. 91-97.

Verfügbar unter: https://doi.org/10.4454/jpp.v99i0.3910

De Maayer, Pieter; Aliyu, Habibu; Vikram, Surendra; Blom, Jochen; Duffy, Brion; Cowan, Don A.; Smits, Theo H.M.; Venter, Stephanus N.; Coutinho, Teresa A.,

2017.

Phylogenomic, pan-genomic, pathogenomic and evolutionary genomic insights into the agronomically relevant enterobacteria Pantoea ananatis and Pantoea stewartii.

Frontiers in Microbiology.

8, S. 1755.

Verfügbar unter: https://doi.org/10.3389/fmicb.2017.01755

Gétaz, Michael; Bühlmann, Andreas; Schneeberger, Pierre H. H.; Van Malderghem, Cinzia; Duffy, Brion; Maes, Martine; Pothier, Joël F.; Cottyn, Bart,

2017.

A diagnostic tool for improved detection of Xanthomonas fragariae using a rapid and highly specific LAMP assay designed with comparative genomics.

Plant Pathology.

66(7), S. 1094-1102.

Verfügbar unter: https://doi.org/10.1111/ppa.12665

Frasson, David; Opoku, Michael; Picozzi, Tara; Torossi, Tania; Balada, Stefanie; Smits, Theo; Hilber, Urs,

2017.

Pseudomonas wadenswilerensis sp. nov. and Pseudomonas reidholzensis sp. nov. : two new species within the Pseudomonas putida group isolated from forest soil.

International Journal of Systematic and Evolutionary Microbiology.

67, S. 2853-2861.

Verfügbar unter: https://doi.org/10.1099/ijsem.0.002035

Kamber, Tim; Pothier, Joël; Pelludat, Cosima; Rezzonico, Fabio; Duffy, Brion; Smits, Theo,

2017.

Role of the type VI secretion systems during disease interactions of Erwinia amylovora with its plant host.

BMC Genomics.

16(628), S. 1-12.

Verfügbar unter: https://doi.org/10.1186/s12864-017-4010-1

Gétaz, Michael; van der Wolf, Jan; Blom, Jochen; Pothier, Joël F.,

2017.

Complete genome sequences of three isolates of Xanthomonas fragariae, the bacterium responsible for angular leaf spots on strawberry plants.

Genome Announcements.

5(32).

Verfügbar unter: https://doi.org/10.1128/genomeA.00642-17

Ruinelli, Michela; Blom, Jochen; Pothier, Joël F.,

2017.

Complete genome sequence of Pseudomonas viridiflava CFBP 1590: isolated from diseased cherry in France.

Genome Announcements.

5(30).

Verfügbar unter: https://doi.org/10.1128/genomeA.00662-17

Rothen, Julian; Schindler, Tobias; Pothier, Joël F.; Younan, Mario; Certa, Ulrich; Daubenberger, Claudia; Pflüger, Valentin; Jores, Joerg,

2017.

Draft genome sequences of seven Streptococcus agalactiae strains isolated from Camelus dromedarius at the horn of Africa.

Genome Announcements.

5(28).

Verfügbar unter: https://doi.org/10.1128/genomeA.00525-17

Schneeberger, Pierre H.H.; Pothier, Joël F.; Bühlmann, Andreas; Duffy, Brion; Beuret, Christian; Utzinger, Jürg; Frey, Jürg E.,

2017.

Development and evaluation of a bioinformatics approach for designing molecular assays for viral detection.

PLOS ONE.

12(5).

Verfügbar unter: https://doi.org/10.1371/journal.pone.0178195

Schmautz, Zala; Graber, Andreas; Jaenicke, Sebastian; Goesmann, Alexander; Junge, Ranka; Smits, Theo H. M.,

2017.

Microbial diversity in different compartments of an aquaponics system.

Archives of Microbiology.

199(4), S. 613-620.

Verfügbar unter: https://doi.org/10.1007/s00203-016-1334-1

Saponari, Maria; Gétaz, Michael; Palkovics, László; Kuzmanović, Nemanja; Puławska, Joanna; Ruinelli, Michela; Pothier, Joël; Obradović, Aleksa; Boscia, Donato; Végh, Anita; Kałużna, Monika,

2017.

Bacterial diseases

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In:

Quero-García, José; Iezzoni, Amy; Puławska, Joanna; Lang, Gregory, Hrsg.,

Cherries : botany, production and uses.

Wallingford:

CAB International.

Palmer, Marike; Steenkamp, Emma T.; Coetzee, Martin P.A.; Chan, Wai-Yin; van Zyl, Elritha; De Maayer, Pieter; Coutinho, Teresa A.; Blom, Jochen; Smits, Theo; Duffy, Brion; Venter, Stephanus N.,

2017.

Phylogenomic resolution of the bacterial genus Pantoea and its relationship with Erwinia and Tatumella.

Antonie van Leeuwenhoek.

110(10), S. 1287-1309.

Verfügbar unter: https://doi.org/10.1007/s10482-017-0852-4

Kupferschmied, Peter; Chai, Tiancong; Flury, Pascale; Blom, Jochen; Smits, Theo; Maurhofer, Monika; Keel, Christoph,

2016.

Specific surface glycan decorations enable antimicrobial peptide resistance in plant-beneficial pseudomonads with insect-pathogenic properties.

Environmental Microbiology.

18(11), S. 4265-4281.

Verfügbar unter: https://doi.org/10.1111/1462-2920.13571

Kałużna, Monika; Willems, Anne; Pothier, Joël F.; Ruinelli, Michela; Sobiczewski, Piotr; Puławska, Joanna,

2016.

Pseudomonas cerasi sp. nov. (non Griffin, 1911) isolated from diseased tissue of cherry.

Systematic and Applied Microbiology.

39(6), S. 370-377.

Verfügbar unter: https://doi.org/10.1016/j.syapm.2016.05.005