Pothier, Joël F.; Kałużna, Monika; Prokić, Andjelka; Obradovic, Aleksa; Rezzonico, Fabio,

2021.

Complete genome and plasmid sequence data of three Xanthomonas arboricola pv. corylina strains, the bacterium responsible for bacterial blight of hazelnut.

Phytopathology.

112(4), S. 956-960.

Verfügbar unter: https://doi.org/10.1094/PHYTO-08-21-0356-A

Doering, Michael; Freimann, Remo; Antenen, Nadine; Roschi, Alexia; Robinson, Christopher T.; Rezzonico, Fabio; Smits, Theo; Tonolla, Diego,

2021.

Microbial communities in floodplain ecosystems in relation to altered flow regimes and experimental flooding.

Science of the Total Environment.

788(147497).

Verfügbar unter: https://doi.org/10.1016/j.scitotenv.2021.147497

Stefani, Emilio; Loreti, Stefania; Costa, Joana; Cunty, Amandine; Pothier, Joël F.,

2021.

PM 7/120 (2) Pseudomonas syringae pv. actinidiae.

EPPO Bulletin

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Fahrentrapp, Johannes; Rezzonico, Fabio,

2021.

Upregulation of gray mold-induced plant genes in uninfected rachis tissue.

International Journal of Pest Management.

69(4), S. 359-365.

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Puławska, Joanna; Kałużna, Monika; Warabieda, Wojciech; Pothier, Joël F.; Gétaz, Michael; van der Wolf, Jan M.,

2020.

Transcriptome analysis of Xanthomonas fragariae in strawberry leaves.

Scientific Reports.

10(20582).

Verfügbar unter: https://doi.org/10.1038/s41598-020-77612-y

Gaganidze, Dali; Sadunishvili, Tinatin; Aznarashvili, Mariam; Abashidze, Ekaterine; Gurielidze, Manana; Carnal, Simon; Rezzonico, Fabio; Zubadalashvili, Manana,

2020.

Fire blight distribution in Georgia and characterization of selected Erwinia amylovora isolates.

Journal of Plant Pathology.

103(Suppl 1), S. 121-129.

Verfügbar unter: https://doi.org/10.1007/s42161-020-00700-5

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2020.

Author correction : roadmap for naming uncultivated archaea and bacteria.

Nature Microbiology.

6(1), S. 136.

Verfügbar unter: https://doi.org/10.1038/s41564-020-00827-2

Dia, Nay C.; Rezzonico, Fabio; Smits, Theo H. M.; Pothier, Joël F.,

2020.

Complete or high-quality draft genome sequences of six Xanthomonas hortorum strains sequenced with short- and long-read technologies.

Microbiology Resource Announcements.

9(41), S. e00828-20.

Verfügbar unter: https://doi.org/10.1128/MRA.00828-20

Martins, Leonor; Fernandes, Camila; Blom, Jochen; Dia, Nay C.; Pothier, Joël F.; Tavares, Fernando,

2020.

Xanthomonas euroxanthea sp. nov. : a new xanthomonad species including pathogenic and non-pathogenic strains of walnut.

International Journal of Systematic and Evolutionary Microbiology.

70(12), S. 6024-6031.

Verfügbar unter: https://doi.org/10.1099/ijsem.0.004386

Kaufmann, Moritz; Schüle, Martin; Smits, Theo; Pothier, Joël,

2020.

Typing plasmids with distributed sequence representation [Paper].

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Springer.

S. 200-210.

Lecture Notes in Computer Science ; 12294.

Verfügbar unter: https://doi.org/10.1007/978-3-030-58309-5_16

Gétaz, Michael; Puławska, Joanna; Smits, Theo H.M.; Pothier, Joël F.,

2020.

Host–pathogen interactions between Xanthomonas fragariae and its host Fragaria × ananassa investigated with a dual RNA-Seq analysis.

Microorganisms.

8(8), S. 1253.

Verfügbar unter: https://doi.org/10.3390/microorganisms8081253

Gétaz, Michael; Blom, Jochen; Smits, Theo H. M.; Pothier, Joël F.,

2020.

Comparative genomics of Xanthomonas fragariae and Xanthomonas arboricola pv. fragariae reveals intra- and interspecies variations.

Phytopathology Research.

2020(2), S. 17.

Verfügbar unter: https://doi.org/10.1186/s42483-020-00061-y

Escursell, Mireia Marcé; Roschi, Alexia; Smits, Theo; Rezzonico, Fabio,

2020.

Characterization and direct molecular discrimination of rpsL mutations leading to high streptomycin resistance in Erwinia amylovora.

Journal of Plant Pathology.

103(Suppl 1), S. 99-108.

Verfügbar unter: https://doi.org/10.1007/s42161-020-00600-8

Murray, Alison E.; Freudenstein, John; Gribaldo, Simonetta; Hatzenpichler, Roland; Hugenholtz, Philip; Kämpfer, Peter; Konstantinidis, Konstantinos T.; Lane, Christopher E.; Papke, R. Thane; Parks, Donovan H.; Rossello-Mora, Ramon; Stott, Matthew B.; Sutcliffe, Iain C.; Thrash, J. Cameron; Venter, Stephanus N.; Whitman, William B.; Acinas, Silvia G.; Amann, Rudolf I.; Anantharaman, Karthik; Armengaud, Jean; Baker, Brett J.; Barco, Roman A.; Bode, Helge B.; Boyd, Eric S.; Brady, Carrie L.; Carini, Paul; Chain, Patrick S. G.; Colman, Daniel R.; DeAngelis, Kristen M.; de los Rios, Maria Asuncion; Estrada-de los Santos, Paulina; Dunlap, Christopher A.; Eisen, Jonathan A.; Emerson, David; Ettema, Thijs J. G.; Eveillard, Damien; Girguis, Peter R.; Hentschel, Ute; Hollibaugh, James T.; Hug, Laura A.; Inskeep, William P.; Ivanova, Elena P.; Klenk, Hans-Peter; Li, Wen-Jun; Lloyd, Karen G.; Löffler, Frank E.; Makhalanyane, Thulani P.; Moser, Duane P.; Nunoura, Takuro; Palmer, Marike; Parro, Victor; Pedrós-Alió, Carlos; Probst, Alexander J.; Smits, Theo H.M.; Steen, Andrew D.; Steenkamp, Emma T.; Spang, Anja; Stewart, Frank J.; Tiedje, James M.; Vandamme, Peter; Wagner, Michael; Wang, Feng-Ping; Hedlund, Brian P.; Reysenbach, Anna-Louise,

2020.

Roadmap for naming uncultivated archaea and bacteria.

Nature Microbiology.

5(8), S. 987-994.

Verfügbar unter: https://doi.org/10.1038/s41564-020-0733-x

Rothen, Julian; Sapugahawatte, Dulmini Nanayakkara; Li, Carmen; Lo, Norman; Vogel, Guido; Foucault, Frédéric; Pflüger, Valentin; Pothier, Joël; Blom, Jochen; Daubenberger, Claudia; Ip, Margaret,

2020.

A simple, rapid typing method for Streptococcus agalactiae based on ribosomal subunit proteins by MALDI-TOF MS.

Scientific Reports.

10(8788).

Verfügbar unter: https://doi.org/10.1038/s41598-020-65707-5

Madhaiyan, Munusamy; Saravanan, Venkatakrishnan Sivaraj; Blom, Jochen; Smits, Theo; Rezzonico, Fabio; Kim, Soo-Jin; Weon, Hang-Yeon; Kwon, Soon-Wo; Whitman, William B.; Ji, Lianghui,

2020.

Phytobacter palmae sp. nov., a novel endophytic, N2 fixing, plant growth promoting Gammaproteobacterium isolated from oil palm (Elaeis guineensis Jacq.).

International Journal of Systematic and Evolutionary Microbiology.

70(2), S. 841-848.

Verfügbar unter: https://doi.org/10.1099/ijsem.0.003834

Fossou, Romain K.; Pothier, Joël F.; Zézé, Adolphe; Perret, Xavier,

2020.

Bradyrhizobium ivorense sp. nov. as a potential local bioinoculant for Cajanus cajan cultures in Côte d’Ivoire.

International Journal of Systematic and Evolutionary Microbiology.

70(2), S. 1421-1430.

Verfügbar unter: https://doi.org/10.1099/ijsem.0.003931

Oh, Woo Taek; Jun, Jin Woo; Giri, Sib Sankar; Yun, Saekil; Kim, Hyoun Joong; Kim, Sang Guen; Kim, Sang Wha; Kang, Jeong Woo; Han, Se Jin; Kwon, Jun; Kim, Ji Hyung; Smits, Theo H.M.; Park, Se Chang,

2019.

Pseudomonas tructae sp. nov., novel species isolated from rainbow trout kidney.

International Journal of Systematic and Evolutionary Microbiology.

69(12), S. 3851-3856.

Verfügbar unter: https://doi.org/10.1099/ijsem.0.003696

Schneeberger, Pierre H. H.; Fuhrimann, Samuel; Becker, Sören L.; Pothier, Joël F.; Duffy, Brion; Beuret, Christian; Frey, Jürg E.; Utzinger, Jürg,

2019.

Qualitative microbiome profiling along a wastewater system in Kampala, Uganda.

Scientific Reports.

9(1), S. 17334.

Verfügbar unter: https://doi.org/10.1038/s41598-019-53569-5

Smits, Theo H.M.,

2019.

The importance of genome sequence quality to microbial comparative genomics.

BMC Genomics.

20(662).

Verfügbar unter: https://doi.org/10.1186/s12864-019-6014-5