Publications of the Environmental Genomics and Systems Biology Research Group
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Palmer, Marike; Steenkamp, Emma T.; Coetzee, Martin P.A.; Chan, Wai-Yin; van Zyl, Elritha; De Maayer, Pieter; Coutinho, Teresa A.; Blom, Jochen; Smits, Theo; Duffy, Brion; Venter, Stephanus N.,
2017.
Antonie van Leeuwenhoek.
110(10), pp. 1287-1309.
Available from: https://doi.org/10.1007/s10482-017-0852-4
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Kupferschmied, Peter; Chai, Tiancong; Flury, Pascale; Blom, Jochen; Smits, Theo; Maurhofer, Monika; Keel, Christoph,
2016.
Environmental Microbiology.
18(11), pp. 4265-4281.
Available from: https://doi.org/10.1111/1462-2920.13571
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Kałużna, Monika; Willems, Anne; Pothier, Joël F.; Ruinelli, Michela; Sobiczewski, Piotr; Puławska, Joanna,
2016.
Pseudomonas cerasi sp. nov. (non Griffin, 1911) isolated from diseased tissue of cherry.
Systematic and Applied Microbiology.
39(6), pp. 370-377.
Available from: https://doi.org/10.1016/j.syapm.2016.05.005
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Ruinelli, Michela; Schneeberger, Pierre H.H; Ferrante, Patrizia; Bühlmann, Andreas; Scortichini, Marco; Vanneste, Joel L.; Duffy, Brion; Pothier, Joël F.,
2016.
Plant Pathology.
66(1), pp. 140-149.
Available from: https://doi.org/10.1111/ppa.12551
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Schneeberger, Pierre H.H.; Becker, Sören L.; Pothier, Joël F.; Duffy, Brion; N'Goran, Eliézer K.; Beuret, Christian; Frey, Jürg E.; Utzinger, Jürg,
2016.
Infection, Genetics and Evolution.
40, pp. 389-397.
Available from: https://doi.org/10.1016/j.meegid.2015.08.044
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Puławska, Joanna; Kuzmanović, Nemanja; Willems, Anne; Pothier, Joël F.,
2016.
Pararhizobium polonicum sp. nov. isolated from tumors on stone fruit rootstocks.
Systematic and Applied Microbiology.
39(3), pp. 164-169.
Available from: https://doi.org/10.1016/j.syapm.2016.03.002
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Rezzonico, Fabio; Smits, Theo; Born, Yannick; Blom, Jochen; Frey, Jürg E.; Goesmann, Alexander; Cleenwerck, Ilse; de Vos, Paul; Bonaterra, Anna; Duffy, Brion; Montesinos, Emilio,
2016.
Erwinia gerundensis sp. nov. : a cosmopolitan epiphyte originally isolated from pome fruit trees.
International Journal of Systematic and Evolutionary Microbiology.
66, pp. 1583-1592.
Available from: https://doi.org/10.1099/ijsem.0.000920
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Kamber, Tim; Buchmann, Jan P.; Pothier, Joël; Smits, Theo; Wicker, Thomas; Duffy, Brion,
2016.
Scientific Reports.
6(21600).
Available from: https://doi.org/10.1038/srep21600
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Kałużna, Monika; Willems, Anne; Pothier, Joël F.; Ruinelli, Michela; Sobiczewski, Piotr; Puławska, Joanna,
2016.
In:
II International Workshop on Bacterial Diseases of Stone Fruits and Nuts.
II International Workshop on Bacterial Diseases of Stone Fruits and Nuts, Izmir, Turkey, 21 April 2015.
International Society for Horticultural Science.
pp. 9-14.
Available from: https://doi.org/10.17660/ActaHortic.2016.1149.2
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Konavko, Dmitrijs; Malchev, Svetoslav; Pothier, Joël F.; Jundzis, Māris; Moročko-Bičevska, Inga; Rezzonico, Fabio,
2016.
Diversity and host range of Pseudomonas in fruit tree species in Latvia.
Acta Horticulturae.
1149, pp. 25-30.
Available from: https://doi.org/10.17660/ActaHortic.2016.1149.5
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Flury, Pascale; Aellen, Nora; Ruffner, Beat; Péchy-Tarr, Maria; Fataar, Shakira; Metla, Zane; Dominguez-Ferreras, Ana; Bloemberg, Guido; Frey, Joachim; Goesmann, Alexander; Raaijmakers, Jos M; Duffy, Brion; Höfte, Monica; Blom, Jochen; Smits, Theo; Keel, Christoph; Maurhofer, Monika,
2016.
ISME Journal: Multidisciplinary Journal of Microbial Ecology.
10, pp. 2527-2542.
Available from: https://doi.org/10.1038/ismej.2016.5
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Wirthner-Bitterlin, Lisa; Reifler-Bächtiger, Martina; Palmisano, Marilena; Egloff, Sophia; Briner, Thomas; Capt, Simon; Graf, Roland F.,
2016.
Kleinsäuger mit Haarproben zuverlässig bestimmen.
Vierteljahrsschrift der Naturforschenden Gesellschaft in Zürich.
161(1), pp. 9-11.
Available from: https://doi.org/10.21256/zhaw-4288
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Smits, Theo H.M.; Rezzonico, Fabio; Blom, Jochen; Goesmann, Alexander; Abelli, Azzurra; Kron Morelli, Roberto; Vanneste, Joël L.; Duffy, Brion,
2015.
Draft genome sequence of the commercial biocontrol strain Pantoea agglomerans P10c.
Genome Announcements.
3(6).
Available from: https://doi.org/10.1128/genomeA.01448-15
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Smits, Theo H. M.; Pothier, Joël F.; Ruinelli, Michela; Blom, Jochen; Frasson, David; Koechli, Chantal; Fabbri, Carlotta; Brandl, Helmut; Duffy, Brion; Sievers, Martin,
2015.
Genome Announcements.
3(3).
Available from: https://doi.org/10.1128/genomeA.00616-15
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De Maayer, Pieter; Chan, Wai-Yin; Martin, Douglas A.; Blom, Jochen; Venter, Stephanus N.; Duffy, Brion; Cowan, Don A.; Smits, Theo H. M.; Coutinho, Teresa A.,
2015.
Frontiers in Microbiology.
6(576).
Available from: https://doi.org/10.3389/fmicb.2015.00576
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Palacio-Bielsa, Ana; López-Soriano, Pablo; Bühlmann, Andreas; van Doorn, Joop; Pham, Khanh; Cambra, Miguel A.; Berruete, Isabel M.; Pothier, Joël F.; Duffy, Brion; Olmos, Antonio; López, María M.,
2015.
Journal of Microbiological Methods.
112, pp. 36-39.
Available from: https://doi.org/10.1016/j.mimet.2015.03.005
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Ziegler, Dominik; Pothier, Joël F.; Ardley, Julie; Kouakou Fossou, Romain; Pflüger, Valentin; de Meyer, Sofie; Vogel, Guido; Tonolla, Mauro; Howieson, John; Reeve, Wayne; Perret, Xavier,
2015.
Ribosomal protein biomarkers provide root nodule bacterial identification by MALDI-TOF MS.
Applied Microbiology and Biotechnology.
99(13), pp. 5547-5562.
Available from: https://doi.org/10.1007/s00253-015-6515-3
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Brankatschk, Kerstin; Kamber, Tim; Pothier, Joël F.; Duffy, Brion; Smits, Theo H.M.,
2014.
Microbial Biotechnology.
7(6), pp. 528-544.
Available from: https://doi.org/10.1111/1751-7915.12104
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Ismail, Emadeldeen; Blom, Jochen; Bultreys, Alain; Ivanovic, Milan; Obradovic, Aleksa; van Doorn, Joop; Bergsma-Vlami, Maria; Maes, Martine; Willems, Anne; Duffy, Brion; Stockwell, Virginia O.; Smits, Theo H.M.; Pulawska, Joanna,
2014.
A novel plasmid pEA68 of Erwinia amylovora and the description of a new family of plasmids.
Archives of Microbiology.
196(12), pp. 891-899.
Available from: https://doi.org/10.1007/s00203-014-1028-5
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Weller-Stuart, Tania; Chan, Wai-Yin; Coutinho, Teresa A.; Venter, Stephanus N.; Smits, Theo H.M.; Duffy, Brion; Goszczynska, Teresa; Cowan, Don A.; de Maayer, Pieter,
2014.
Genome Announcements.
2(4).
Available from: https://doi.org/10.1128/genomeA.00750-14