Publications of the Environmental Genomics and Systems Biology Research Group
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Kałużna, Monika; Willems, Anne; Pothier, Joël F.; Ruinelli, Michela; Sobiczewski, Piotr; Puławska, Joanna,
2016.
In:
II International Workshop on Bacterial Diseases of Stone Fruits and Nuts.
II International Workshop on Bacterial Diseases of Stone Fruits and Nuts, Izmir, Turkey, 21 April 2015.
International Society for Horticultural Science.
pp. 9-14.
Available from: https://doi.org/10.17660/ActaHortic.2016.1149.2
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Konavko, Dmitrijs; Malchev, Svetoslav; Pothier, Joël F.; Jundzis, Māris; Moročko-Bičevska, Inga; Rezzonico, Fabio,
2016.
Diversity and host range of Pseudomonas in fruit tree species in Latvia.
Acta Horticulturae.
1149, pp. 25-30.
Available from: https://doi.org/10.17660/ActaHortic.2016.1149.5
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Flury, Pascale; Aellen, Nora; Ruffner, Beat; Péchy-Tarr, Maria; Fataar, Shakira; Metla, Zane; Dominguez-Ferreras, Ana; Bloemberg, Guido; Frey, Joachim; Goesmann, Alexander; Raaijmakers, Jos M; Duffy, Brion; Höfte, Monica; Blom, Jochen; Smits, Theo; Keel, Christoph; Maurhofer, Monika,
2016.
ISME Journal: Multidisciplinary Journal of Microbial Ecology.
10, pp. 2527-2542.
Available from: https://doi.org/10.1038/ismej.2016.5
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Wirthner-Bitterlin, Lisa; Reifler-Bächtiger, Martina; Palmisano, Marilena; Egloff, Sophia; Briner, Thomas; Capt, Simon; Graf, Roland F.,
2016.
Kleinsäuger mit Haarproben zuverlässig bestimmen.
Vierteljahrsschrift der Naturforschenden Gesellschaft in Zürich.
161(1), pp. 9-11.
Available from: https://doi.org/10.21256/zhaw-4288
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Smits, Theo H.M.; Rezzonico, Fabio; Blom, Jochen; Goesmann, Alexander; Abelli, Azzurra; Kron Morelli, Roberto; Vanneste, Joël L.; Duffy, Brion,
2015.
Draft genome sequence of the commercial biocontrol strain Pantoea agglomerans P10c.
Genome Announcements.
3(6).
Available from: https://doi.org/10.1128/genomeA.01448-15
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Smits, Theo H. M.; Pothier, Joël F.; Ruinelli, Michela; Blom, Jochen; Frasson, David; Koechli, Chantal; Fabbri, Carlotta; Brandl, Helmut; Duffy, Brion; Sievers, Martin,
2015.
Genome Announcements.
3(3).
Available from: https://doi.org/10.1128/genomeA.00616-15
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De Maayer, Pieter; Chan, Wai-Yin; Martin, Douglas A.; Blom, Jochen; Venter, Stephanus N.; Duffy, Brion; Cowan, Don A.; Smits, Theo H. M.; Coutinho, Teresa A.,
2015.
Frontiers in Microbiology.
6(576).
Available from: https://doi.org/10.3389/fmicb.2015.00576
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Palacio-Bielsa, Ana; López-Soriano, Pablo; Bühlmann, Andreas; van Doorn, Joop; Pham, Khanh; Cambra, Miguel A.; Berruete, Isabel M.; Pothier, Joël F.; Duffy, Brion; Olmos, Antonio; López, María M.,
2015.
Journal of Microbiological Methods.
112, pp. 36-39.
Available from: https://doi.org/10.1016/j.mimet.2015.03.005
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Ziegler, Dominik; Pothier, Joël F.; Ardley, Julie; Kouakou Fossou, Romain; Pflüger, Valentin; de Meyer, Sofie; Vogel, Guido; Tonolla, Mauro; Howieson, John; Reeve, Wayne; Perret, Xavier,
2015.
Ribosomal protein biomarkers provide root nodule bacterial identification by MALDI-TOF MS.
Applied Microbiology and Biotechnology.
99(13), pp. 5547-5562.
Available from: https://doi.org/10.1007/s00253-015-6515-3
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Brankatschk, Kerstin; Kamber, Tim; Pothier, Joël F.; Duffy, Brion; Smits, Theo H.M.,
2014.
Microbial Biotechnology.
7(6), pp. 528-544.
Available from: https://doi.org/10.1111/1751-7915.12104
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Ismail, Emadeldeen; Blom, Jochen; Bultreys, Alain; Ivanovic, Milan; Obradovic, Aleksa; van Doorn, Joop; Bergsma-Vlami, Maria; Maes, Martine; Willems, Anne; Duffy, Brion; Stockwell, Virginia O.; Smits, Theo H.M.; Pulawska, Joanna,
2014.
A novel plasmid pEA68 of Erwinia amylovora and the description of a new family of plasmids.
Archives of Microbiology.
196(12), pp. 891-899.
Available from: https://doi.org/10.1007/s00203-014-1028-5
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Weller-Stuart, Tania; Chan, Wai-Yin; Coutinho, Teresa A.; Venter, Stephanus N.; Smits, Theo H.M.; Duffy, Brion; Goszczynska, Teresa; Cowan, Don A.; de Maayer, Pieter,
2014.
Genome Announcements.
2(4).
Available from: https://doi.org/10.1128/genomeA.00750-14
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Bühlmann, Andreas; Dreo, Tanja; Rezzonico, Fabio; Pothier, Joël F.; Smits, Theo H. M.; Ravnikar, Maja; Frey, Jürg E.; Duffy, Brion,
2014.
Environmental Microbiology.
16(7), pp. 2112-2125.
Available from: https://doi.org/10.1111/1462-2920.12289
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van der Wolf, Jan M.; Nijhuis, Els H.; Kowalewska, Malgorzata J.; Saddler, Gerry S.; Parkinson, Neil; Elphinstone, John G.; Pritchard, Leighton; Toth, Ian K.; Lojkowska, Ewa; Potrykus, Marta; Waleron, Malgorzata; de Vos, Paul; Cleenwerck, Ilse; Pirhonen, Minna; Garlant, Linda; Hélias, Valérie; Pothier, Joël F.; Pflüger, Valentin; Duffy, Brion; Tsror, Leah; Manulis, Shula,
2014.
International Journal of Systematic and Evolutionary Microbiology.
64, pp. 768-774.
Available from: https://doi.org/10.1099/ijs.0.052944-0
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Smits, Theo H.M.; Guerrero-Prieto, V. M.; Hernandez-Escarcega, G.; Rezzonico, Fabio; Blom, J.; Goesmann, A.; Duffy, Brion; Stockwell, V. O.,
2014.
Comparative genomics of Erwinia amylovora isolates from Mexico[paper].
In:
XIII International Workshop on Fire Blight, Zurich, Switzerland, 2-5 July 2013.
International Society for Horticultural Science.
pp. 173-177.
Available from: https://doi.org/10.17660/ActaHortic.2014.1056.27
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Djaimurzina, A.; Umiralieva, Z.; Zharmukhamedova, G.; Born, Yannick; Bühlmann, A.; Rezzonico, Fabio,
2014.
Acta Horticulturae.
1056, pp. 129-132.
Available from: https://doi.org/10.17660/ActaHortic.2014.1056.18
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Razinger, Jaka; Lutz, Matthias; Schroers, Hans-Josef; Palmisano, Marilena; Wohler, Christian; Urek, Gregor; Grunder, Jürg,
2014.
Journal of Invertebrate Pathology.
120, pp. 59-66.
Available from: https://doi.org/10.1016/j.jip.2014.05.006
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2014.
Nanopore-based instruments as biosensors for future planetary missions.
Astrobiology.
14(4), pp. 344-351.
Available from: https://doi.org/10.1089/ast.2013.1120
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Bonaterra, Anna; Badosa, Esther; Rezzonico, Fabio; Duffy, Brion; Montesinos, Emilio,
2014.
Phenotypic comparison of clinical and plant-beneficial strains of Pantoea agglomerans.
International Microbiology.
17(2), pp. 81-90.
Available from: https://doi.org/10.2436/20.1501.01.210
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Almario, Juliana; Gobbin, Davide; Défago, Geneviève; Moënne-Loccoz, Yvan; Rezzonico, Fabio,
2014.
Prevalence of type III secretion system in effective biocontrol pseudomonads.
Research in Microbiology.
165(4), pp. 300-304.
Available from: https://doi.org/10.1016/j.resmic.2014.03.008