Projects & Publications

Small to medium-sized projects are often carried out in the context of semester projects, bachelor’s or master’s theses in the programs Applied Digital Life Sciences (BSc), Medical Laboratory Diagnostics (BSc) and Applied Computational Life Sciences (MSc). We are always open to new project ideas and collaborations.

Since our launch in spring 2025, we have completed a first set of projects, laying the foundation for future developments at C²D².

Our projects at a glance, grouped by thematic area:

• Raman spectroscopy for blood group identification. Donna Karedan, Master’s thesis, ongoing. Supervision: Adisa Trnjanin / Simone Ulzega

• Automated morphological analysis of erythrocytes and anemia classification. Nadine Ottiger, Bachelor’s thesis, 2025. Supervision: Adisa Trjanin / Jules Traversari / Sven Hirsch

• Digitizing and automating the workflow for the evaluation of antibody specification tests in immunohaematology. Leo Kieffer, Bachelor’s thesis, 2025, Supervision: Adisa Trjanin / Jules Traversari / Sven Hirsch

• Automated analysis of digital Gram stained bacteria. Planned. Supervision: Adisa Trjanin / Christoph / Jules Traversari
• Image-based identification of Mycobacteria in histological tissue samples. Planned, Supervison: Adisa Trjanin / Giovanni Ghielmetti / Jules Traversari

• Next-generation sequencing Data Analysis of a Candida auris. Planned. Supervision: Adisa Trnjanin / Tugçe Bilgin Sonay / Salome 
• Spatial Transcriptom Sequencing and Data Analysis in Wound healing, planned, Supervision: Adisa Trjanin / Tugçe Bilgin Sonay / Salome Stierli

• Algorithmic prediction of renal function based on biochemical markers. Jasmin Varga-Linder, Bachelor’s thesis, 2025. Supervision: Sandro Manni/Julia Traversari /Sven Hirsch
• Analysis of factors influencing cardiac troponin levels in blood. Raphael Müller, Bachelor’s thesis, 2025. Supervision: Adisa Trnjanin/Georg Spinner