Dr. Dominik Refardt

Dr. Dominik Refardt
ZHAW
Life Sciences und Facility Management
Institut für Umwelt und Natürliche Ressourcen
Grüentalstrasse 14
8820 Wädenswil
Persönliches Profil
Leitungsfunktion
- Stv. Abteilungsleitung Forschungsbereich Ökotechnologien und Energiesysteme
- Leitung Forschungsgruppe Aquakultursysteme
Tätigkeit an der ZHAW
Dozent
www.zhaw.ch/de/lsfm/institute-zentren/iunr/ecological-engineering/aquakultursysteme/
Arbeits- und Forschungsschwerpunkte, Spezialkenntnisse
Heute: Mikroalgen, Cyanobakterien, Nährstoffrecyling, Nährstoffbilanzen, erneuerbare Ressourcen, Nachhaltigkeit, Abwasser, Aquakultur
Gestern: mikrobielle Evolution, mikrobielle Ökologie, Wirts-Parasiten-Systeme, Wasserflöhe, Bakteriophagen, Mikrosporidien
Aus- und Fortbildung
Führungsausbildung (2020, Zürcher Hochschule für Angewandte Wissenschaften)
CAS Hochschuldidaktik (2017, Pädagogische Hochschule Zürich)
Doktorat in Biologie (2005, Université de Fribourg)
Diplomstudium Biologie (Diplom 2001, Universität Basel)
Beruflicher Werdegang
seit 2016 Dozent an der ZHAW Wädenswil
2012-2015 Wissenschaftlicher Mitarbeiter an der ZHAW Wädenswil
2008-2012 Postdoctoral Researcher an der ETH Zürich
2006-2008 Postdoctoral Researcher an der Auckland University und an der Massey University, Neuseeland
Mitglied in Netzwerken
- Swiss Algae Consortium Association (vice president)
- Innovationsgruppe Aquakultur
- European Percid Fish Culture Core Group
- MyAquacultureFarm
- Schweizer Jugend forscht (Fachexperte Biologie und Umwelt)
- European Algae Biomass Association EABA
- ChorBasel
Projekte
- Etablierung analytischer Methoden für die Aquakultur / Stellv. ProjektleiterIn / Projekt laufend
- AWACS – Animal Welfare Assessment and Control System for Fish Farms / Teammitglied / Projekt laufend
- Förderung des Seesaiblings im Zürichsee / Teammitglied / Projekt abgeschlossen
- Ökotechnologie Living Lab / Teammitglied / Projekt abgeschlossen
- BIOMAT (Integrated Bio-based Materials Value Chains) / Co-ProjektleiterIn / Projekt abgeschlossen
- DONALD - Fischzucht mit Denitrifikation / Stellv. ProjektleiterIn / Projekt abgeschlossen
- Nachhaltig produzierte Wasserlinsen als mögliche neue Proteinquelle für die Aquakultur / ProjektleiterIn / Projekt abgeschlossen
- Stabilized Lipids from Microalgae / Stellv. ProjektleiterIn / Projekt abgeschlossen
- Fish Welfare / ProjektleiterIn / Projekt abgeschlossen
- Biogas2Algae / ProjektleiterIn / Projekt abgeschlossen
- Nachhaltige Kultivierung von Mikroalgen zur Energiegewinnung / ProjektleiterIn / Projekt abgeschlossen
- Phototrophe Kultivierung von Mikroalgen im Pilotmassstab / ProjektleiterIn / Projekt abgeschlossen
Publikationen
-
Mariotto, Marina; Egloff, Sophia; Fritz, Ines; Refardt, Dominik,
2023.
Algal Research.
70(103013).
Verfügbar unter: https://doi.org/10.1016/j.algal.2023.103013
-
Stadtlander, Timo; Tschudi, Fridolin; Seitz, Andreas; Sigrist, Mathias; Refardt, Dominik; Leiber, Florian,
2023.
Aquaculture Research.
2023(6680943).
Verfügbar unter: https://doi.org/10.1155/2023/6680943
-
Kupczok, Anne; Bailey, Zachary M.; Refardt, Dominik; Wendling, Carolin C.,
2022.
Co-transfer of functionally interdependent genes contributes to genome mosaicism in lambdoid phages.
Microbial Genomics.
8(11), S. 000915.
Verfügbar unter: https://doi.org/10.1099/mgen.0.000915
-
Pulgarin, Adrian; Decker, Jérémie; Chen, Jiahua; Giannakis, Stefanos; Ludwig, Christian; Refardt, Dominik; Pick, Horst,
2022.
Water Research.
226(119301).
Verfügbar unter: https://doi.org/10.1016/j.watres.2022.119301
-
Wendling, Carolin C.; Refardt, Dominik; Hall, Alex R.,
2021.
Evolution.
75(2), S. 515-528.
Verfügbar unter: https://doi.org/10.1111/evo.14153
-
Tschirren, Linda; Bachmann, David Andrea; Güler, Ali Cem; Blaser, Oliver; Rhyner, Nicola; Seitz, Andreas; Zbinden, Erich; Wahli, Thomas; Segner, Helmut; Refardt, Dominik,
2021.
MyFishCheck : a model to assess fish welfare in aquaculture.
Animals.
11(1), S. 145.
Verfügbar unter: https://doi.org/10.3390/ani11010145
-
Pulgarin, Adrian; Kapeller, Alexander Garcia; Tarik, Mohamed; Egloff, Sophia; Mariotto, Marina; Ludwig, Christian; Refardt, Dominik,
2021.
Journal of Cleaner Production.
324.
Verfügbar unter: https://doi.org/10.1016/j.jclepro.2021.129238
-
Tejido-Nuñez, Yaiza; Aymerich, Enrique; Sancho, Luis; Refardt, Dominik,
2020.
Algal Research.
49(101940).
Verfügbar unter: https://doi.org/10.1016/j.algal.2020.101940
-
Pulgarin, Adrian; Giannakis, Stefanos; Pulgarin, César; Ludwig, Christian; Refardt, Dominik,
2020.
Applied Catalysis B: Environmental.
265(118615).
Verfügbar unter: https://doi.org/10.1016/j.apcatb.2020.118615
-
Tejido-Nuñez, Yaiza; Aymerich, Enrique; Sancho, Luis; Refardt, Dominik,
2019.
Ecological Engineering.
136, S. 1-9.
Verfügbar unter: https://doi.org/10.1016/j.ecoleng.2019.05.021
-
Egloff, Sophia; Tschudi, Fridolin; Schmautz, Zala; Refardt, Dominik,
2018.
Algal Research.
34, S. 68-74.
Verfügbar unter: https://doi.org/10.1016/j.algal.2018.07.004
-
Pleška, Maroš; Lang, Moritz; Refardt, Dominik; Levin, Bruce R.; Guet, Călin C.,
2018.
Phage–host population dynamics promotes prophage acquisition in bacteria with innate immunity.
Nature Ecology & Evolution.
2(2), S. 359-366.
Verfügbar unter: https://doi.org/10.1038/s41559-017-0424-z
-
Peng, Gaël; Vogel, Frédéric; Refardt, Dominik; Ludwig, Christian,
2017.
Catalytic supercritical water gasification : continuous methanization of Chlorella vulgaris.
Industrial & Engineering Chemistry Research.
56(21), S. 6256-6265.
Verfügbar unter: https://doi.org/10.1021/acs.iecr.7b00042
-
Damergi, Eya; Schwitzguébel, Jean-Paul; Refardt, Dominik; Sharma, Shivom; Holliger, Christof; Ludwig, Christian,
2017.
Algal Research.
25, S. 488-495.
Verfügbar unter: https://doi.org/10.1016/j.algal.2017.05.003
-
Wendling, Carolin Charlotte; Piecyk, Agnes; Refardt, Dominik; Chibani, Cynthia Maria; Hertel, Robert; Liesegang, Heiko; Bunk, Boyke; Overmann, Jörg; Roth, Olivia,
2017.
BMC Evolutionary Biology.
17(1), S. 98.
Verfügbar unter: https://doi.org/10.1186/s12862-017-0930-2
-
Bagnoud-Velásquez, Mariluz; Refardt, Dominik; Vuille, François; Ludwig, Christian,
2015.
Chimia.
69(10), S. 614-621.
Verfügbar unter: https://doi.org/10.2533/chimia.2015.614
-
Refardt, Dominik,
2022.
Lab life : when your PhD (almost) falls apart.
eLife.
11, S. e81548.
Verfügbar unter: https://doi.org/10.7554/eLife.81548
-
Montpart Planell, Nuria; Membrez, Yves; Refardt, Dominik,
2015.
Biomasse und Holzenergie
.
Bern:
Bundesamt für Energie.
Verfügbar unter: https://doi.org/10.21256/zhaw-2655
-
Graber, Andreas; Leiblein, Thomas; Refardt, Dominik; Junge, Ranka,
2013.
Potential of algae turf scrubbers (ATS™) for elimination of phosphorus from swimming ponds [Paper].
In:
Borin, Maurizio; Malagoli, Mario; Salvato, Michela; Tanis, Benek, Hrsg.,
Wetland Systems Ecology, Functioning and Management.
8th Society of Wetland Scientists (SWS) European Chapter International Conference, Padova, Italy, 1-4 September 2013.
Padova:
P.A.N..
S. 29-30.
Verfügbar unter: https://doi.org/10.21256/zhaw-1612
Publikationen vor Tätigkeit an der ZHAW
Vávra, J., M. Hylis, I. Fiala, D. Refardt, R. Larsson. 2016. Microsporidia in a woodland pool I. Lanatospora costata sp. n. (Opisthosporidia, Microsporidia), parasite of Megacyclops viridis (Crustacea, Copepoda): fine structure and molecular phylogeny. Acta Protozool 55:269-280. dx.doi.org/10.4467/16890027AP.16.023.6010
Armanious, A., M. Aeppli, J. Ronald, D. Refardt, T. Sigstam, T. Kohn & M. Sander. 2016. Viruses at solid-water interfaces: A systematic assessment of interactions driving adsorption. Env Sci Tech 50:732-743. dx.doi.org/10.1021/acs.est.5b04644
Haag, K.L., T.Y. James, J.-F. Pombert, R. Larsson, T.M.M. Schaer, D. Refardt & D. Ebert. 2014. Evolution of a morphological novelty occurred before genome compaction in a lineage of extreme parasites. Proc Natl Acad Sci USA 111:15480–15485. dx.doi.org/10.1073/pnas.1410442111
Refardt, D. & R. Kümmerli. 2013. Defying bacteriophages: contrasting altruistic with individual-based resistance mechanisms in Escherichia coli. Communicative & Integrative Biology 6:e25159. dx.doi.org/10.4161/cib.25159
Refardt, D., T. Bergmiller & R. Kümmerli. 2013. Altruism can evolve when relatedness is low: Evidence from bacteria committing suicide upon phage infection. Proceedings of the Royal Society B: Biological Sciences 280:20123035. dx.doi.org/10.1098/rspb.2012.3035. Recommended by F1000Prime
Refardt, D. 2012. Real-time quantitative PCR to discriminate and quantify lambdoid bacteriophages of Escherichia coli K-12. Bacteriophage 2:98-104. dx.doi.org/10.4161/bact.20092
Refardt, D. 2012. Combining forces to target bacteria (invited commentary). Evolutionary Applications 5:537-539. dx.doi.org/10.1111/j.1752-4571.2012.00255.x
Refardt, D. & D. Ebert. 2012. The impact of infection on host competition and its relationship to parasite persistence in a Daphnia microparasite system. Evolutionary Ecology 26:95-107. dx.doi.org/10.1007/s10682-011-9487-5
Refardt, D. 2011. Within-host competition determines reproductive success of temperate bacteriophages. ISME Journal 5:1451-1460. dx.doi.org/10.1038/ismej.2011.30
Haag, K.L., J.I.R. Larsson, D. Refardt & D. Ebert. 2011. Cytological and molecular description of Hamiltosporidium tvaerminnensis gen. et sp. nov., a microsporidian parasite of Daphnia magna, and establishment of Hamiltosporidium magnivora comb. nov. Parasitology 138:447-462. dx.doi.org/10.1017/S0031182010001393
Refardt, D. & P.B. Rainey. 2010. Tuning a genetic switch: Experimental evolution and natural variation of prophage induction. Evolution 64:1086-1097. dx.doi.org/10.1111/j.1558-5646.2009.00882.x
Refardt, D., E. Decaestecker, P.T.J. Johnson & J. Vávra. 2008. Morphology, molecular phylogeny, and ecology of Binucleata daphniae n. g., n. sp (Fungi: Microsporidia), a parasite of Daphnia magna Straus, 1820 (Crustacea: Branchiopoda). Journal of Eukaryotic Microbiology 55:393-408. dx.doi.org/10.1111/j.1550-7408.2008.00341.x
Refardt, D. & D. Ebert. 2007. Inference of parasite local adaptation using two different fitness components. Journal of Evolutionary Biology 20:921-929. dx.doi.org/10.1111/j.1420-9101.2007.01307.x
Refardt, D. & L. Mouton. 2007. Reverse arrangement of rRNA subunits in the microsporidium Glugoides intestinalis. Journal of Eukaryotic Microbiology 54:83-85. dx.doi.org/10.1111/j.1550-7408.2006.00149.x
Refardt, D. & D. Ebert. 2006. Quantitative PCR to detect, discriminate and quantify intracellular parasites in their host: an example from three microsporidians in Daphnia. Parasitology 133:11-18. doi.org/10.1017/S0031182006000060
Zbinden, M., S. Lass, D. Refardt, J. Hottinger & D. Ebert. 2005. Octosporea bayeri: fumidil B inhibits vertical transmission in Daphnia magna. Experimental Parasitology 109:58-61
Mucklow, P.T., D.B. Vizoso, K.H. Jensen, D. Refardt & D. Ebert. 2004. Variation in phenoloxidase activity and its relation to parasite resistance within and between populations of Daphnia magna. Proceedings of the Royal Society B: Biological Sciences 271:1175-1183
Canning, E.U., D. Refardt, C.R. Vossbrinck, B. Okamura & A. Curry. 2004. Correction for genus Bryonosema (Microsporidia, Pseudonosematidae). European Journal of Protistology 40:69-69
Canning, E.U., D. Refardt, C.R. Vossbrinck, B. Okamura & A. Curry. 2002. New diplokaryotic microsporidia (Phylum Microsporidia) from freshwater bryozoans (Bryozoa, Phylactolaemata). European Journal of Protistology 38:247-265
Refardt, D., E.U. Canning, A. Mathis, S.A. Cheney, N.J. Lafranchi-Tristem & D. Ebert. 2002. Small subunit ribosomal DNA phylogeny of microsporidia that infect Daphnia (Crustacea: Cladocera). Parasitology 124:381-389. doi.org/10.1017/S0031182001001305
Canning, E.U., A. Curry, S.A. Cheney, N.J. Lafranchi-Tristem, D. Ebert, D. Refardt, M. Killick-Kendrick, R. Killick-Kendrick. 2001. Flabelliforma montana (Phylum Microsporidia) from Phlebotomus ariasi (Diptera, Psychodidae): Ultrastructural observations and phylogenetic relationships. European Journal of Protistology 37:207-221