Dr. Victor Garcia

Projects

• SmartRecipe - Real-Time Production Optimization / Team member / ongoing
• A top-down indicator of lean-green alignment in small and medium-sized enterprises / Deputy project leader / completed
• Digital Tools for Codon Optimization / Project leader / completed
• Dynamik Knowledge Platform / Co-project leader / completed
• The effect of programmed ribosomal frameshifting on codon usage bias / Team member / completed
• Exploring the silent fitness landscape / Team member / completed

Publications

Articles in scientific journal, peer-reviewed

• Garcia, V., Horn, C. and Ott, T. (2022) 'The sciences of data – moving towards a comprehensive systems perspective', Archives of Data Science, Series A, 8(2). doi: 10.5445/IR/1000150241.
• Zrimec, J. et al. (2021) 'Learning the regulatory code of gene expression', Frontiers in Molecular Biosciences, 8(673363). doi: 10.3389/fmolb.2021.673363.
• Cadosch, D. et al. (2020) 'Understanding the spread of de novo and transmitted macrolide-resistance in Mycoplasma genitalium', PeerJ, 8, p. e8913. doi: 10.7717/peerj.8913.
• Garcia, V., Bonhoeffer, S. and Fu, F. (2020) 'Cancer-induced immunosuppression can enable effectiveness of immunotherapy through bistability generation : a mathematical and computational examination', Journal of Theoretical Biology, 492(110185). doi: 10.1016/j.jtbi.2020.110185.
• Garcia, V., Zoller, S. and Anisimova, M. (2018) 'Accounting for programmed ribosomal frameshifting in the computation of codon usage bias indices', G3 - Genes, Genomes, Genetics, 8(10), pp. 3173–3183. doi: 10.1534/g3.118.200185.
• Smid, J. H. et al. (2018) 'Age difference between heterosexual partners in Britain : implications for the spread of Chlamydia trachomatis', Epidemics, 24, pp. 60–66. doi: 10.1016/j.epidem.2018.03.004.
• Garcia, V. et al. (2018) 'Clonal interference can cause wavelet-like oscillations of multilocus linkage disequilibrium', Journal of the Royal Society Interface, 15(140). doi: 10.1098/rsif.2017.0921.
• Riesen, M. et al. (2017) 'Modeling the consequences of regional heterogeneity in human papillomavirus (HPV) vaccination uptake on transmission in Switzerland', Vaccine, 35(52), pp. 7312–7321. doi: 10.1016/j.vaccine.2017.10.103.
• Garcia, V. and Feldman, M. W. (2017) 'Within-epitope interactions can bias CTL escape estimation in early HIV infection', Frontiers in Immunology, 8(423). doi: 10.3389/fimmu.2017.00423.
• Garcia, V., Feldman, M. W. and Regoes, R. R. (2016) 'Investigating the consequences of interference between multiple CD8+ T cell escape mutations in early HIV infection', PLOS Computational Biology, 12(2), pp. 1–23. doi: 10.1371/journal.pcbi.1004721.
• Garcia, V. et al. (2015) 'Estimating the in vivo killing efficacy of cytotoxic T lymphocytes across different peptide-MHC complex densities', PLOS Computational Biology, 11(5), pp. 1–13. doi: 10.1371/journal.pcbi.1004178.

Other publications

• Baumann, I., Garcia, V. and Metz, F. (2018) 'Heat, greed and human need : climate change, capitalism and sustainable wellbeing. Gough, Ian. Cheltenham, Edward Elgar Publishing (2017), 264 p., ISBN 978-1-785-36512-6', Swiss Political Science Review, 25(1), pp. 95–100. doi: 10.1111/spsr.12336.
• Garcia, V., Zoller, S. and Anisimova, M. (2018) 'Accounting for programmed ribosomal frameshifting in the computation of codon usage bias indices', in Symposium on Quantitative Network Biology, Kandersteg, 19-20 November 2018.
• Garcia, V., Zoller, S. and Anisimova, M. (2018) 'Programmed ribosomal frameshifting and codon usage bias', in Hirsch, S. (ed.) Life in Numbers 4.0. ZHAW Zürcher Hochschule für Angewandte Wissenschaften. doi: 10.21256/zhaw-4023.

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