Publications according to DDC572: Biochemistry

• Bergmann, Alan J.; Simon, Eszter; Schifferli, Andrea; Schönborn, Andreas; Vermeirssen, Etiënne L. M.,

  2020.

  Estrogenic activity of food contact materials : evaluation of 20 chemicals using a yeast estrogen screen on HPTLC or 96-well plates.

  Analytical and Bioanalytical Chemistry.

  412(19), pp. 4527-4536.

  Available from: https://doi.org/10.1007/s00216-020-02701-w

• Delucchi, Matteo; Schaper, Elke; Sachenkova, Oxana; Elofsson, Arne; Anisimova, Maria,

  2020.

  A new census of protein tandem repeats and their relationship with intrinsic disorder.

  Genes.

  11(4), pp. 407.

  Available from: https://doi.org/10.3390/genes11040407

• Trifan, Adriana; Wolfram, Evelyn; Esslinger, Nils; Grubelnik, Andreas; Skalicka‐Woźniak, Krystyna; Minceva, Mirjana; Luca, Simon Vlad,

  2020.

  Globoidnan A, rabdosiin and globoidnan B as new phenolic markers in European‐sourced comfrey (Symphytum officinale L.) root samples.

  Phytochemical Analysis.

  32(4), pp. 482-494.

  Available from: https://doi.org/10.1002/pca.2996

• Arn, Fabienne; Frasson, David; Kroslakova, Ivana; Rezzonico, Fabio; Pothier, Joël; Riedl, Rainer; Sievers, Martin,

  2020.

  Isolation and identification of actinomycetes strains from Switzerland and their biotechnological potential.

  Chimia.

  74(5), pp. 382-390.

  Available from: https://doi.org/10.2533/chimia.2020.382

• Fahrentrapp, Johannes,

  2020.

  Spatial transcriptional response of plants induced by compatible pathogens and its potential use in biosensor plants

  .

  In:

  Poltronieri, Palmiro; Hong, Yiguo, eds.,

  Applied Plant Biotechnology for Improving Resistance to Biotic Stress.

  San Diego:

  Academic Press.

  pp. 137-149.

  Available from: https://doi.org/10.1016/B978-0-12-816030-5.00006-9

• Silov, Serhii; Zaburannyi, Nestor; Anisimova, Maria; Ostash, Bohdan,

  2020.

  The use of the rare TTA codon in Streptomyces genes : significance of the codon context?.

  Indian Journal of Microbiology.

  61(1), pp. 24-30.

  Available from: https://doi.org/10.1007/s12088-020-00902-6

• Iliescu, Iolanda Alca; Peter, Samuel; Albert, Ina; Skalicka‐Woźniak, Krystyna; Miron, Anca; Luca, Simon Vlad; Wolfram, Evelyn,

  2020.

  Verbascum nigrum : cytotoxicity evaluation in A431 epidermoid carcinoma cells and untargeted LC‐HR‐MS/MS metabolite profiling.

  Chemistry & Biodiversity.

  17(12), pp. e2000644.

  Available from: https://doi.org/10.1002/cbdv.202000644

• Ostash, Bohdan; Anisimova, Maria,

  2020.

  Visualizing codon usage within and across genomes : concepts and tools

  .

  In:

  Srinivasa, K. G.; Siddesh, G. M.; Manisekhar, S. R., eds.,

  Statistical Modelling and Machine Learning Principles for Bioinformatics Techniques, Tools, and Applications.

  pp. 213-288.

  Algorithms for Intelligent Systems.

  Available from: https://doi.org/10.1007/978-981-15-2445-5_13

• Oh, Woo Taek; Jun, Jin Woo; Giri, Sib Sankar; Yun, Saekil; Kim, Hyoun Joong; Kim, Sang Guen; Kim, Sang Wha; Kang, Jeong Woo; Han, Se Jin; Kwon, Jun; Kim, Ji Hyung; Smits, Theo H.M.; Park, Se Chang,

  2019.

  Pseudomonas tructae sp. nov., novel species isolated from rainbow trout kidney.

  International Journal of Systematic and Evolutionary Microbiology.

  69(12), pp. 3851-3856.

  Available from: https://doi.org/10.1099/ijsem.0.003696

• Tørresen, Ole K; Star, Bastiaan; Mier, Pablo; Andrade-Navarro, Miguel A; Bateman, Alex; Jarnot, Patryk; Gruca, Aleksandra; Grynberg, Marcin; Kajava, Andrey V; Promponas, Vasilis J; Anisimova, Maria; Jakobsen, Kjetill S; Linke, Dirk,

  2019.

  Tandem repeats lead to sequence assembly errors and impose multi-level challenges for genome and protein databases.

  Nucleic Acids Research.

  47(21), pp. 10994-11006.

  Available from: https://doi.org/10.1093/nar/gkz841

• Smits, Theo H.M.,

  2019.

  The importance of genome sequence quality to microbial comparative genomics.

  BMC Genomics.

  20(662).

  Available from: https://doi.org/10.1186/s12864-019-6014-5

• van Mierlo, Joël; Hagens, Steven; Witte, Sander; Klamert, Silvia; van de Straat, Leoni; Fieseler, Lars,

  2019.

  Complete genome sequences of escherichia coli phages vB_EcoM-EP75 and vB_EcoP-EP335.

  Microbiology Resource Announcements.

  8(16).

  Available from: https://doi.org/10.1128/MRA.00078-19

• Stuby, Johann; Gravestock, Isaac; Wolfram, Evelyn; Pichierri, Giuseppe; Steurer, Johann; Burgstaller, Jakob M.,

  2019.

  Appetite-suppressing and satiety-increasing bioactive phytochemicals : a systematic review.

  Nutrients.

  11(9), pp. 2238.

  Available from: https://doi.org/10.3390/nu11092238

• Rutz, Dominik; Frasson, David; Sievers, Martin; Blom, Jochen; Rezzonico, Fabio; Pothier, Joël F.; Smits, Theo H.M.,

  2019.

  Comparative genomic analysis of the biotechnological potential of the novel species Pseudomonas wadenswilerensis CCOS 864T and Pseudomonas reidholzensis CCOS 865T.

  Diversity.

  2019(11), pp. 204.

  Available from: https://doi.org/10.3390/d11110204

• Ruinelli, Michela; Blom, Jochen; Smits, Theo; Pothier, Joël,

  2019.

  Comparative genomics and pathogenicity potential of members of the Pseudomonas syringae species complex on Prunus spp.

  BMC Genomics.

  20(172).

  Available from: https://doi.org/10.1186/s12864-019-5555-y

• Faccio, Greta; Cont, Alice; Mailand, Erik; Zare-Eelanjegh, Elaheh; Innocenti Malini, Riccardo; Maniura-Weber, Katharina; Rossi, René M.; Spano, Fabrizio,

  2019.

  Complete inclusion of bioactive molecules and particles in polydimethylsiloxane : a straightforward process under mild conditions.

  Scientific Reports.

  9(1), pp. 17575.

  Available from: https://doi.org/10.1038/s41598-019-54155-5

• Böselt, Lennard; Sidler, Dominik; Kittelmann, Tobias; Stohner, Jürgen; Zindel, Daniel; Wagner, Trixie; Riniker, Sereina,

  2019.

  Determination of absolute stereochemistry of flexible molecules using a vibrational circular dichroism spectra alignment algorithm.

  Journal of Chemical Information and Modeling.

  59(5), pp. 1826-1838.

  Available from: https://doi.org/10.1021/acs.jcim.8b00789

• Weyland, Mathias; Thumser-Henner, Pauline; Rohrer Bley, Carla; Ulzega, Simone; Petri-Fink, Alke; Lattuada, Marco; Scheidegger, Stephan; Füchslin, Rudolf Marcel,

  2019.

  Dynamic DNA damage and repair modelling : bridging the gap between experimental damage readout and model structure [paper].

  In:

  Cagnoni, Stefano; Mordonini, Monica; Pecori, Riccardo; Roli, Andrea; Villani, Marco, eds.,

  Artificial Life and Evolutionary Computation.

  XIII International Workshop on Artificial Life and Evolutionary Computation (WIVACE), Parma, Italy, 10-12 September 2018.

  Cham:

  Springer.

  pp. 127-137.

  Communications in Computer and Information Science ; 900.

  Available from: https://doi.org/10.1007/978-3-030-21733-4_10

• Anisimova, Maria, ed.,

  2019.

  Evolutionary genomics : statistical and computational methods.

  Second Edition.

  New York:

  Humana.

  Methods in Molecular Biology.

  ISBN 978-1-4939-9073-3.

  Available from: https://doi.org/10.1007/978-1-4939-9074-0

• Rutz, Dominik; Frasson, David; Sievers, Martin; Blom, Jochen; Rezzonico, Fabio; Pothier, Joël F.; Smits, Theo H. M.,

  2019.

  High-quality draft genome sequence of Pseudomonas reidholzensis strain CCOS 865T.

  Microbiology Resource Announcements.

  8(3).

  Available from: https://doi.org/10.1128/MRA.01502-18

• Kosiol, Carolin; Anisimova, Maria,

  2019.

  Selection acting on genomes

  .

  In:

  Anisimova, Maria, ed.,

  Evolutionary genomics : statistical and computational methods.

  Humana.

  pp. 373-397.

  Methods in Molecular Biology.

  Available from: https://doi.org/10.1007/978-1-4939-9074-0_12

• Zhao, F. J.; Bonmarin, Mathias; Chen, Z. C.; Larson, M.; Fay, D.; Runnoe, D.; Heikenfeld, J.,

  2019.

  Ultra-simple wearable local sweat volume monitoring patch based on swellable hydrogels.

  Lab on a Chip.

  Available from: https://doi.org/10.1039/C9LC00911F

• Trifan, Adriana; Vasincu, Alexandru; Luca, Simon Vlad; Neophytou, Christiana; Wolfram, Evelyn; Opitz, Sebastian; Sava, Daciana; Bucur, Laura; Cioroiu, Bogdan I.; Miron, Anca; Aprotosoaie, Ana Clara; Cioanca, Oana; Hancianu, Monica; Jitareanu, Alexandra; Constantinou, Andreas I.,

  2019.

  Unravelling the potential of seaweeds from the Black Sea coast of Romania as bioactive compounds sources : part I: Cystoseira barbata (Stackhouse) C. Agardh.

  Food and Chemical Toxicology.

  134(110820).

  Available from: https://doi.org/10.1016/j.fct.2019.110820

• Poltera, Sonja,

  2019.

  Untersuchung des Lipidgehalts und Beeinflussung der Lipidproduktion von Mikroalgen durch Nährstofflimitierung : Optimierung und Anwendung der Lipidmarkierung mit Nilrot.

  Winterthur:

  ZHAW Zürcher Hochschule für Angewandte Wissenschaften.

  Available from: https://doi.org/10.21256/zhaw-24251

• Smits, Theo H.M.; Rezzonico, Fabio; Frasson, David; Vesga, Pilar; Vacheron, Jordan; Blom, Jochen; Pothier, Joël F.; Keel, Christoph; Maurhofer, Monika; Sievers, Martin,

  2019.

  Updated genome sequence and annotation for the full genome of Pseudomonas protegens CHA0.

  Microbiology Resource Announcements.

  8(39).

  Available from: https://doi.org/10.1128/MRA.01002-19