Dr. Johannes Fahrentrapp

Dr. Johannes Fahrentrapp

Dr. Johannes Fahrentrapp
ZHAW School of Life Sciences and Facility Management
Grüental
8820 Wädenswil

+41 (0) 58 934 54 50
johannes.fahrentrapp@zhaw.ch

Personal profile

Position at the ZHAW

Research Fellow

http://www.iunr.zhaw.ch/weinbau

Expertise and research interests

Physiology of grapes,
phytopatholgy of selected diseases and pests,
Early disease detection,
gene mapping
reflectance imaging

Projects ongoing:
>Systemic disease response of Solanum lycopersicon, 2015-2017; CHF 180k; SERI Grant C14.0094; related to COST Action FA1208 and COST Action FA1306
>COST Action FA1306 The quest for tolerant varieties: phenotyping at plant and cellular level, 2014-2018, Swiss delegate Management Committee


Supervision
MSc students ongoing:
>Julia Eichmann 2015/16: Expression analyses of selected genes of Vitis vinifera during early infection stages of its major pathogens
>Irene Bühlmann 2015/16: Trapping Drosophila suzukii in different crops
>Sam Faghihinasab 2016/17: Remote sensing of plant disease

BSc students ongoing:
>Adrian Rubi& Lorenz Rieger: Wirkung von aktiv belüftetem Komposttee (AACT) auf die Weinrebe

BSc students comleted:
>Anna Strutt 2015: Vergleich der Fangerfolgen verschiedener Fallen für Drosophila suzukii im Rebberg
>Nico Jud: Konstruktion und Bau Mähgerät für den Weinbau

Semester projects BSc/MSc
>Irene Bühlmann 2016: Tutorial3, scientific work evaluation: pending
>Irene Bühlmann 2016: Tutorial2, project implementation: Bunch Stem Necrosis and Berry Shrivel: Occurrence observed with cultivar Pinot Noir (V. vinifera L.)
>Irene Bühlmann 2016:Tutorial1,proposal development: Collection of Asian grapevine cultivars.
>Julia Eichmann 2016: Tutorial3, scientific work evaluation
>Julia Eichmann 2105 Tutorial2, project implementation: Conductance of steps toward cloning of a plasmid with the traits: [promoter of early expressed gene under Plasmopara viticola infection]::VvMybA1 for Agrobacterium-mediated transformation of Vitis vinifera
>Julia Eichmann 2015: Tutorial1, proposal development: Engineering a biosensor-plant indicating Plasmopara viticola infection of grapevine cultivar (Vitis vinifera) Pinot noir
>Emmanuel Dietrich 2015: Stiellähme - der ungelöste Dauerbrenner im Weinbau
>Roman Langenegger & Nico Jud 2013: Mähgerät für den Weinbau
>Jeanine Altenburger 2013: Nachweis von Phytoplasmen in Zikaden
>Fabio Kuonen 2013: Auswirkungen von H2O und N Über- sowie Unterversorgung bei Blauburgunder Topfreben
>Beatrice Gut 2013: Umstellung auf Bio: Chancen und Risiken für grössere Weinbaubetriebe in der Schweiz
>Barbara Segmüller 2013: Genexpression von Vitis vinfera nach Infektion mit Plasmopara viticola

Educational background

Academic studies in biology at Albert Ludwigs University of Freiburg i. Br., Germany. Diploma thesis: "Examination of the interaction of Plasmopara viticola and Vitis vinifera"
PhD in phytopathology at ETH Zürich, Switzerland. PhD Thesis: "Fire Blight Resistance of Malus x robusta 5"

Membership of networks

Projects

Project team leader

Project team member

Publications

; Rupp, Oliver; Fahrentrapp, Johannes,

2017.

Pathogen recognition in compatible plant-microbe interactions

.

Scientific Reports.

7(6383),

Available under: https://doi.org/10.21256/zhaw-1487

Rupp, Oliver; Nicot, Philippe; Fahrentrapp, Johannes; ; Duffy, Brion,

2016.

Do susceptible plants recognize their enemy?

.

In:

COST Action FA1306: The quest for tolerant varieties – Phenotyping at plant and cellular level, FA1306 Working Group 2 Meeting, INRA, Versailles, France, 1–2 February 2016.

Books and editorships

().

Fire blight resistance of Malus x robusta 5

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Zürich: Eidgenössische Technische Hochschule ETH Zürich.

Peer-reviewed articles/chapters

; ; ; ; ().

Identifying local drivers of a vector-pathogen-disease system using Bayesian modeling

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Basic and Applied Ecology, 18 75-85. Peer reviewed.

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Rapid fingerprinting of grape volatile composition using secondary electrospray ionization orbitrap mass spectrometry: A preliminary study of grape ripening

.

Food Control, 81 107-122. Peer reviewed.

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Grapevine germplasm collections of Switzerland

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Vitis, 54 259-260. Peer reviewed.

; ; ().

Is There Need for Leaf-Galling Grape Phylloxera Control?

: Presence and Distribution of Dactulosphaira vitifoliae in Swiss Vineyards.

International Journal of Pest Management, doi: 10.1080/09670874.2015.1067734, 61(4). 340-345. Peer reviewed.

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Engineering fire blight resistance into the apple cultivar 'Gala' using the FB_MR5 CC-NBS-LRR resistance gene of Malus × robusta 5 Giovanni

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Plant Biotechnology Journal, DOI: 10.1111/pbi.12177 Peer reviewed.

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A candidate gene for Fire Blight resistance in Malus × robusta 5 is coding for a CC-NBS-LRR

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Tree Genetics & Genomes, 9, 1. 237-251. Peer reviewed.

; ; ().

Quantitative PCR assay for detection of bois noir phytoplasmas in grape and insect tissue

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Vitis, 52, 2. 85-89. Peer reviewed.

Non-peer-reviewed articles/chapters

; ; ().

Spatio-temporal transcriptional effects of compatible pathogen attack in tomato

.

Acta Horticulturae in press.

; ; ().

Budget Remote Phenotyping – Potential and limitations of consumer-grade NIRGB and Red Edge cameras for early detection of plant leaf diseases

: Poster.

In: 2nd general meeting COST Action FA1306. Conference. (18. April 2016). Copenhagen: FA1306.

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PHYLLI – an international database for grape phylloxera (Daktulosphaira vitifoliae Fitch)

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IOBC WPRS, in press

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Airborne and Ground-Based Platforms for Data Collection in Small Vineyards: Examples from the UK and Switzerland

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Geophysical Research Abstracts, 17, 13019.

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Identifying physiological differences in highly fragmented vineyards using NIR/RGB UAV photography

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19th International Meeting of Viticulture GiESCO, 2 660-663.

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Insecticides trials against foliar grape phylloxera

: Poster.

In: IOBC VITICULTURE 2015, Working Group Meeting on Integrated Protection and Production in Viticulture. Conference. Vienna: AGES.

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PHYLLI – an international database for grape phylloxera (Daktulosphaira vitifoliae Fitch)

: Presentation.

In: IOBC VITICULTURE 2015, Working Group Meeting on Integrated Protection and Production in Viticulture. Conference Vienna:

; ().

Die Reblaus in der Schweiz

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Schweizer Zeitschrift für Obst- und Weinbau, 9 6-9.

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Grape Phylloxera

: Presentation.

In: ISHS phylloxera working group. International congress. (16. Oktober 2014). Rauscedo, Italy: ISHS.

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Grape phylloxera infestation rate in Switzerland

.

IOBC-WPRS Bulletin, 105 237-239.

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Grapevine Collection of the Zurich University of Applied Sciences

: Poster.

In: PROGRESS IN VITIS VINIFERA DIVERSITY EVALUATION AND USE. COST Action FA1003 - GRAPENET - East-West Collaboration for Grapevine Diversity Exploration and Mobilization of Adaptive Traits for Breeding. (7. Oktober 2014). Oeiras, Portugal: INIAV.

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Grapevine production during Climate Change

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Xth International Terroir Congress, Tokaj, Hungary

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Grapevine Production During Climate Change

: Poster.

In: X. Terroir Congress. International congress. (7. Juli 2014). Tokaj, Ungary: xx.

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News of Malus x robusta candidate resistance gene

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Acta Hort. (ISHS) in press.

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A candidate gene of Malus x robusta 5 for breeding towards fire blight resistance

.

Acta Hort. (ISHS), 976 573-575.

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Cisgenic Approach for Improved Disease Resistance in Apple

.

Acta Hort. (ISHS) , 974 117-121.

; ; ().

Grape phylloxera infestation rate in Switzerland

: Poster.

In: IOBC-WPRS Meeting of the Working Group on "Integrated Protection and Production in Viticulture". International congress. (13. Oktober 2013). Ascona, Switzerland: IOBC.

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Informationen zum Projekt Reblaus

.

In: Regionalen Rebbautagung 2013. Wädenswil: Agroscope Wädenswil.

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QTL Mapping for Resistance to Fire Blight Using Several Erwinia amylovora Strains Resulting in Different Host-Pathogen Interactions

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Acta Hort. (ISHS) , 976. 509-512.

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Proof of existence of different host-pathogen interactions between the wild apple (Malus × robusta) and the causal agent of fire blight (Erwinia amylovora) by means of QTL mapping.

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Julius-Kühn-Archiv, 438 176.

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Sélection de variétés de fruits tolérantes au feu bactérien

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Revue suisse Viticulture, Arboriculture, Horticulture, 44(6). 350-356.

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Züchtung feuerbrandrobuster Obstsorten

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Schweizer Zeitschrift für Obst- und Weinbau, 14

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Fine Mapping of Fire Blight Resistance Locus in Malus x robusta 5 on Linkage group 3

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Acta Hort. (ISHS), 896 243-244.

Publications before appointment at the ZHAW

International conferences:

B. Panassiti, J. Fahrentrapp, M. Breuer, R. Biedermann (2013). "Analysis of the temporal and small-scale distribution of Hyalesthes obsoletus, vector of 'bois noir', in a vineyard in Baden (Germany)", Proceedings of the 3rd European Bois Noir Workshop, Barcelona, Spain.

Fahrentrapp J, Broggini GAL, Kellerhals M, Malnoy M, Peil A, Richter K, Gessler C (2012). “News of Malus x robusta candidate resistance gene“. Biotech Fruit II, Nelson. New Zealand, Presentation.

Fahrentrapp J, Broggini GAL, Malnoy M, Zini E, Peil A, Richter K, Kellerhals K and Gessler C (2011). “Looking into the Region of Resistance against Fire Blight of M. x robusta 5”. COST864 Final Meeting, Hasselt, Belgium, Presentation.

Fahrentrapp J, Broggini GAL, Kellerhals M, Malnoy M, Peil A, Richter K, Gessler C (2011). “A Candidate Gene of Malus x robusta 5 for Breeding Towards Fire Blight Resistance”, XIII EUCARPIA meeting on Fruit breeding and Genetics, September, 2011, Warsaw, Poland, Presentation.

Fahrentrapp J, Seibicke T, Kassemeyer HH (2010). “Characterization of the Necrosis Producing Protein NPPpv from Plasmopara viticola Belonging to the Nep1-like Protein Family (NLPs) and its Putative Role in the Host-Pathogen-Interaction”. 6th International Workshop of Grapevine Downy and Powdery Mildew, Bordeaux, France, ISBN 978-2-7380-1279-1.

Fahrentrapp J, Broggini GAL, Peil A, Malnoy M, Zini E, Kellerhals M, Gessler C (2010). “Fine Mapping of the Fire Blight Resistance Lcus in Malus robusta 5 on linkage group 3”. 12th International Workshop on Fire Blight, Warsaw, Poland, Presentation

Fahrentrapp J, Michl G, Breuer M (2008). “Establishing a Real Time PCR for the Detection of Common Types of Bois Noir Phytoplasmas.” 1st European Bois noir Workshop, Weinsberg, Germany, Poster.

Fahrentrapp J, Michl G, Breuer M (2008). “Re-Colonisation of Hyalesthes obsoletus in a Newly Terraced Vineyard.” 1st European Bois noir Workshop, Weinsberg, Germany, Presentation.

Breuer M, Fahrentrapp J, Michl G (2008). „Geographical Distribution of Bois Noir and Hyalesthes obsoletus in Baden (SW Germany)”. 1st European Bois noir Workshop, Weinsberg, Germany.