Dr. Johannes Fahrentrapp

Position at the ZHAW

Research Fellow

http://www.iunr.zhaw.ch/weinbau

Expertise and research interests

Physiology of grapes,
phytopatholgy of selected diseases and pests,
Early disease detection,
gene mapping
reflectance imaging

Projects ongoing:
>Systemic disease response of Solanum lycopersicon, 2015-2017; CHF 180k; SERI Grant C14.0094; related to COST Action FA1208 and COST Action FA1306
>COST Action FA1306 The quest for tolerant varieties: phenotyping at plant and cellular level, 2014-2018, Swiss delegate Management Committee


Supervision
MSc students ongoing:
>Julia Eichmann 2015/16: Expression analyses of selected genes of Vitis vinifera during early infection stages of its major pathogens
>Irene Bühlmann 2015/16: Trapping Drosophila suzukii in different crops
>Sam Faghihinasab 2016/17: Remote sensing of plant disease

BSc students ongoing:
>Adrian Rubi& Lorenz Rieger: Wirkung von aktiv belüftetem Komposttee (AACT) auf die Weinrebe

BSc students comleted:
>Anna Strutt 2015: Vergleich der Fangerfolgen verschiedener Fallen für Drosophila suzukii im Rebberg
>Nico Jud: Konstruktion und Bau Mähgerät für den Weinbau

Semester projects BSc/MSc
>Irene Bühlmann 2016: Tutorial3, scientific work evaluation: pending
>Irene Bühlmann 2016: Tutorial2, project implementation: Bunch Stem Necrosis and Berry Shrivel: Occurrence observed with cultivar Pinot Noir (V. vinifera L.)
>Irene Bühlmann 2016:Tutorial1,proposal development: Collection of Asian grapevine cultivars.
>Julia Eichmann 2016: Tutorial3, scientific work evaluation
>Julia Eichmann 2105 Tutorial2, project implementation: Conductance of steps toward cloning of a plasmid with the traits: [promoter of early expressed gene under Plasmopara viticola infection]::VvMybA1 for Agrobacterium-mediated transformation of Vitis vinifera
>Julia Eichmann 2015: Tutorial1, proposal development: Engineering a biosensor-plant indicating Plasmopara viticola infection of grapevine cultivar (Vitis vinifera) Pinot noir
>Emmanuel Dietrich 2015: Stiellähme - der ungelöste Dauerbrenner im Weinbau
>Roman Langenegger & Nico Jud 2013: Mähgerät für den Weinbau
>Jeanine Altenburger 2013: Nachweis von Phytoplasmen in Zikaden
>Fabio Kuonen 2013: Auswirkungen von H2O und N Über- sowie Unterversorgung bei Blauburgunder Topfreben
>Beatrice Gut 2013: Umstellung auf Bio: Chancen und Risiken für grössere Weinbaubetriebe in der Schweiz
>Barbara Segmüller 2013: Genexpression von Vitis vinfera nach Infektion mit Plasmopara viticola

Educational background

Academic studies in biology at Albert Ludwigs University of Freiburg i. Br., Germany. Diploma thesis: "Examination of the interaction of Plasmopara viticola and Vitis vinifera"
PhD in phytopathology at ETH Zürich, Switzerland. PhD Thesis: "Fire Blight Resistance of Malus x robusta 5"

Membership of networks

• Schweizer Gesellschaft für Phytomedizin
• Deutsche Phytomedizinische Gesellschaft e.V.
• ISHS - International Society for Horticultural Science

• Multispektrale Bildgebung: Der Schlüssel zur Früherkennung von Blattkrankheiten / ProjektleiterIn / 04.06.2017
• Automated Airborne Pest Monitoring AAPM of Drosophila suzukii in Crops and Natural Habitats / ProjektleiterIn / 01.04.2017
• Systemic disease response of Solanum lycopersicon / ProjektleiterIn / 01.04.2015
• Occurence of grape phylloxera (Dactulosphaira vitifoliae) in Switzerland / ProjektleiterIn / 01.07.2013
• Detection of Bois noir phytoplasma in the vectoring ciciid Hyalethes obsoletus. / ProjektleiterIn / 01.01.2013
• Expression of Vitis vinifera genes during downy mildew infection / ProjektleiterIn / 01.01.2013

• Farrell, Ross R.; Fahrentrapp, Johannes; García-Gómez, Diego; Martinez-Lozano Sinues, Pablo; Zenobi, Renato,

  2017.

  Rapid fingerprinting of grape volatile composition using secondary electrospray ionization orbitrap mass spectrometry : a preliminary study of grape ripening

  .

  Food Control.

  81,

  S. 107-122.

  Available under: https://doi.org/10.1016/j.foodcont.2017.04.041

• Eichmann, Julia; Rezzonico, Fabio; Fahrentrapp, Johannes,

  2017.

  Gene expression analyses of selected genes of Vitis vinifera during early infection stages of Plasmopara viticola and Botrytis cinerea

  .

  Acta Horticulturae.

  1188(36),

  S. 279-284.

  Available under: https://doi.org/10.17660/ActaHortic.2017.1188.36

• Fahrentrapp, Johannes; Duffy, Brion; Nicot, Philippe,

  2017.

  Spatio-temporal transcriptional effects of compatible pathogen attack in tomato

  .

  Acta Horticulturae.

• Panassiti, Bernd; Hartig, Florian; Fahrentrapp, Johannes; Breuer, Michael; Biedermann, Robert,

  2017.

  Identifying local drivers of a vector-pathogen-disease system using Bayesian modeling

  .

  Basic and Applied Ecology.

  18,

  S. 75-85.

  Available under: https://doi.org/10.1016/j.baae.2016.11.005

• Rezzonico, Fabio; Rupp, Oliver; Fahrentrapp, Johannes,

  2017.

  Pathogen recognition in compatible plant-microbe interactions

  .

  Scientific Reports.

  7(6383),

  Available under: https://doi.org/10.21256/zhaw-1487

• Fahrentrapp, Johannes; Geilhausen, Martin; Laube, Patrick,

  2016.

  Budget remote phenotyping : potential and limitations of consumer-grade NIRGB and red edge cameras for early detection of plant leaf diseases

  [Poster].

  In:

  2nd general COST MEETING, Copenhagen, Denmark, April 18–20, 2016.

• Rupp, Oliver; Nicot, Philippe; Fahrentrapp, Johannes; Rezzonico, Fabio; Duffy, Brion,

  2016.

  Do susceptible plants recognize their enemy?

  .

  In:

  COST Action FA1306: The quest for tolerant varieties – Phenotyping at plant and cellular level, FA1306 Working Group 2 Meeting, INRA, Versailles, France, 1–2 February 2016.

• Forneck, A.; Dockner, V.; Mammerler, R.; Powell, KS.; Kocsis, L.; Papura, D.; Fahrentrapp, Johannes; Riaz, S.; Walker, MA.,

  2015.

  PHYLLI : an international database for grape phylloxera (Daktulosphaira vitifoliae Fitch)

  .

  In:

  IOBC-WPRS WG Meeting, Integrated Protection and Production in Viticulture, Vienna, Austria, October 20–22, 2015.

• Linder, Christian; Kehrli, Patrik; Fahrentrapp, Johannes,

  2015.

  Insecticides trials against foliar grape phylloxera

  [Poster].

  In:

  IOBC-WPRS WG Meeting, Integrated Protection and Production in Viticulture, Vienna, Austria, October 20–22, 2015.

• Fahrentrapp, Johannes; Schumacher, Peter; Viret, Olivier; Spring, JL; Burger, G; Oppliger, B; Hardegger, M,

  2015.

  Grapevine germplasm collections of Switzerland

  .

  Vitis: journal of grapevine research.

  54,

  S. 259-260.

  Available under: https://ojs.openagrar.de/index.php/VITIS/article/view/5068

• Fahrentrapp, Johannes; Häfele, Martin; Schumacher, Peter; Gomez, Cristina; Green, David R.,

  2015.

  Identifying physiological differences in highly fragmented vineyards using NIR/RGB UAV photography

  [Paper].

  In:

  19th GiESCO International Meeting Proceedings.

  19th GiESCO International Meeting, Gruissan, France, 31 May - 5 June 2015.

  660-663.

• Green, David R.; Gómez, Cristina; Fahrentrapp, Johannes,

  2015.

  Airborne and ground-based platforms for data collection in small vineyards: examples from the UK and Switzerland

  .

  Geophysical Research Abstracts.

  17(13019),

• Fahrentrapp, Johannes; Müller, Lukas; Schumacher, Peter;

  2015.

  Is there need for leaf-galling grape phylloxera control? : presence and distribution of Dactulosphaira vitifoliae in Swiss vineyards

  .

  International Journal of Pest Management.

  61(4),

  S. 340-345.

  Available under: https://doi.org/10.1080/09670874.2015.1067734

• Fahrentrapp, Johannes; Schifferli, Andrin; Schumacher, Peter,

  2014.

  Grapevine collection of the Zurich University of Applied Sciences

  [Poster].

  In:

  Progress in Vitis vinifera Diversity Evaluation and Use, Oeiras, Portugal, October 7–8, 2014.

• Fahrentrapp, Johannes; Geilhausen, Martin; Schumacher, Peter,

  2014.

  Grapevine production during climate change

  [Poster].

  In:

  X. International Terroir Congress, Tokaj - Eger, Hungary, 7 - 10 July 2014.

• Broggini, Giovanni A. L.; Wöhner, Thomas; Fahrentrapp, Johannes; Kost, Thomas D.; Flachowsky, Henryk; Peil, Andreas; Hanke, Maria-Viola; Richter, Klaus; Patocchi, Andrea; Gessler, Cesare,

  2014.

  Engineering fire blight resistance into the apple cultivar 'Gala' using the FB_MR5 CC-NBS-LRR resistance gene of Malus × robusta 5 Giovanni

  .

  Plant Biotechnology Journal.

  12(6),

  S. 728-733.

  Available under: https://doi.org/10.1111/pbi.12177

• Fahrentrapp, Johannes,

  2014.

  Grape Phylloxera

  .

  In:

  I International Symposium on Grapevine Roots, Rauscedo, Italy, 16 - 17 October 2014.

• Fahrentrapp, Johannes; Schumacher, Peter;

  2014.

  Die Reblaus in der Schweiz

  .

  Obst- und Weinbau.

  9,

  S. 6-9.

• Fahrentrapp, Johannes; Geilhausen, Martin; Schumacher, Peter,

  2014.

  Grapevine production during climate change

  .

  In:

  Xth International Terroir Congress, Tokaj-Eger, Hungary, 7-10 July 2014.

• Fahrentrapp, Johannes; Müller, Lukas; Schumacher, Peter,

  2014.

  Grape phylloxera infestation rate in Switzerland

  [Paper].

  In:

  Calonnec, Agnès; Hrsg., Duso, Carlo; Hrsg., Gessler, Cesare; Hrsg., Lucchi, Andrea; Hrsg., Maixner, Michael; Hrsg., Sharon, Rakefet; Hrsg., Thiéry, Denis, Hrsg.,

  Working Group "Integrated protection and production in Viticulture" : Proceedings of the meeting in Ascona, Switzerland, 13 - 17 October 2013.

  IOBC-WPRS Meeting of the Working Group "Integrated protection and production in Viticulture", Ascona, Switzerland, 13 - 17 October 2013.

  Darmstadt:

  IOBC-WPRS.

  237-239.

  IOBC-WPRS Bulletin.

• Fahrentrapp, Johannes; Müller, Lukas; Schumacher, Peter,

  2013.

  Grape phylloxera infestation rate in Switzerland

  [Poster].

  In:

  IOBC-WPRS Meeting of the Working Group on "Integrated Protection and Production in Viticulture", Ascona, Switzerland, 13 -17 October 2013.

• Broggini, GAL; Durel, CE; Vergne, E; Chevreau, E; Fahrentrapp, Johannes; Vanblaere, T; Peil, A; Flachowsky, H; Hanke, MV; Krens, FA; Schouten, HJ; Gessler, Cesare,

  2013.

  Cisgenic approach for improved disease resistance in apple

  [Paper].

  In:

  Veale, M.A., Hrsg.,

  Proceedings of the 2nd genetically modified organisms in horticulture symposium.

  II Genetically Modified Organisms in Horticulture Symposium, White River, South Africa, September 11–15, 2012.

  Leuven:

  International Society for Horticultural Science (ISHS).

  117-122.

  Acta horticulturae : technical communications of ISHS.

  Available under: https://doi.org/10.17660/ActaHortic.2013.974.13

• Fahrentrapp, Johannes; Broggini, GAL; Peil, A; Kellerhals, M; Malnoy, M; Richter, K; Gessler, Cesare,

  2013.

  A candidate gene of Malus x robusta 5 for breeding towards fire blight resistance

  [Paper].

  In:

  Evens, KM; Hrsg., Lata, B; Hrsg., Kellerhals, M, Hrsg.,

  Proceedings of the Thirteenth Eucarpia Symposium on Fruit Breeding and Genetics.

  XIII Eucarpia Symposium on Fruit Breeding and Genetics, Warsaw, Poland, September 11–15, 2011.

  Leuven:

  International Society for Horticultural Science (ISHS).

  Acta horticulturae : technical communications of ISHS.

  Available under: https://doi.org/10.17660/ActaHortic.2013.976.82

• Fahrentrapp, Johannes; Broggini, Giovanni A. L.; Kellerhals, Markus; Peil, Andreas; Richter, Klaus; Zini, Elena; Gessler, Cesare,

  2013.

  A candidate gene for fire blight resistance in Malus × robusta 5 is coding for a CC-NBS-LRR

  .

  Tree Genetics & Genomes.

  9(1),

  S. 237-251.

  Available under: https://doi.org/10.21256/zhaw-1825

• Fahrentrapp, Johannes,

  2013.

  Informationen zum Projekt Reblaus

  .

  In:

  Regionale Rebbautagung, Agroscope, Wädenswil, Schweiz, 2013.

• Fahrentrapp, Johannes; Michl, Gertraud; Breuer, Michael,

  2013.

  Quantitative PCR assay for detection of bois noir phytoplasmas in grape and insect tissue

  .

  VITIS: Journal of Grapevine Research.

  52(2),

  S. 85-89.

  Available under: https://doi.org/10.21256/zhaw-2679

• Wöhner, T; Vogt, I; Peil, A; Flachowsky, H; Hanke, M-V; Richter, K; Gessler, Cesare; Broggini, GAL; Fahrentrapp, Johannes; Garcia-Libreros, T,

  2013.

  QTL mapping for resistance to fire blight using several Erwinia amylovora strains resulting in different host-pathogen interactions

  [Paper].

  In:

  Evans, K.M.; Hrsg., Lata, B.; Hrsg., Kellerhals, M., Hrsg.,

  Proceeding of the XIIIth EUCARPIA Symposium on Fruit Breeding and Genetics.

  XIII Eucarpia Symposium on Fruit Breeding and Genetics, Warsaw, Poland, September 11–15, 2011.

  Leuven:

  International Society for Horticultural Science.

  509-512.

  Acta horticulturae : technical communications of ISHS.

  Available under: https://doi.org/10.17660/ActaHortic.2013.976.72

• Kellerhals, Markus; Baumgartner, Isabelle; Leumann, Lucie; Lussi, Luzia; Patocchi, Andrea; Le Roux, Pierre-Marie; Egger, Simon; Christen, Danilo; Leumann, Reto; Kobelt, Markus; Weber, Michael; Fahrentrapp, Johannes; Boggini, Giovanni; Gessler, Cesare,

  2012.

  Sélection de variétés de fruits tolérantes au feu bactérien

  .

  Revue Suisse de Viticulture, Arboriculture et Horticulture.

  44(6),

  S. 350-356.

  Available under: http://www.revuevitiarbohorti.ch/artikel/2012_06_f_309.pdf

• Wöhner, T.; Vogt, I.; Richter, K.; Wensing, A.; Geider, K.; Sundin, G.-W.; Savory, E.-A.; Day, B.; Hanke, V.; Gessler, C.; Broggini, G.; Fahrentrapp, Johannes; Peil, A.; Flachowsky, H.,

  2012.

  Nachweis für die Existenz unterschiedlicher Wirt-Pathogen-Interaktionen zwischen dem Wildapfel Malus × robusta 5 und dem Erreger des Feuerbrandes (Erwinia amylovora) mittels QTL-Kartierung

  .

  In:

  58. Deutsche Pflanzenschutztagung, Braunschweig, 10.-14. September 2012.

  Julius Kühn-Institut, Bundesforschungsinstitut für Kulturpflanzen.

  Available under: https://ojs.openagrar.de/index.php/JKA/article/view/698/2272

• Fahrentrapp, Johannes,

  2012.

  Fire blight resistance of Malus x robusta 5

  [Dissertation].

  Zürich:

  Eidgenössische Technische Hochschule ETH Zürich.

  Available under: https://doi.org/10.21256/zhaw-1824

• Kellerhals, Markus; Baumgartner, Isabelle; Leumann, Lucie; Lussi, Luzia; Christen, Danilo; Patocchi, Andrea; Le Roux, Pierre-Marie; Leumann, Reto; Koblet, Markus; Weber, Michael; Fahrentrapp, Johannes; Broggini, Giovanni; Gessler, Cesare,

  2012.

  Züchtung feuerbrandrobuster Obstsorten

  .

  Obst- und Weinbau: Schweizer Zeitschrift für Obst- und Weinbau.

  14(148),

  S. 12-15.

• Fahrentrapp, Johannes; Broggini, GAL; Gessler, C; Kellerhals, M; Peil, A; Malnoy, M; Richter, K,

  2011.

  Fine mapping of fire blight resistance locus in Malus x Robusta 5 on linkage group 3

  [Paper].

  In:

  Proceedings of the XIIIth EUCARPIA Symposium on Fruit Breeding and Genetics.

  XIII Eucarpia Symposium on Fruit Breeding and Genetics, Warsaw, Poland, 11.-15. September 2011.

  International Society for Horticultural Science.

  Acta horticulturae : technical communications of ISHS.

  Available under: https://doi.org/10.17660/ActaHortic.2013.976.70

Non-peer-reviewed articles/chapters

• Forneck, A.; Dockner, V.; Mammerler, R.; Powell, KS.; Kocsis, L.; Papura, D.; Fahrentrapp, Johannes; Riaz, S.; Walker, MA. (2016).

  PHYLLI – an international database for grape phylloxera (Daktulosphaira vitifoliae Fitch)

  .

  IOBC WPRS, in press

• Fahrentrapp, Johannes; Broggini, GAL; Kellerhals, M; Malnoy, M; Peil, A; Richter, K; Gessler, C (2014).

  News of Malus x robusta candidate resistance gene

  .

  Acta Hort. (ISHS) in press.

Publications before appointment at the ZHAW

International conferences:

B. Panassiti, J. Fahrentrapp, M. Breuer, R. Biedermann (2013). "Analysis of the temporal and small-scale distribution of Hyalesthes obsoletus, vector of 'bois noir', in a vineyard in Baden (Germany)", Proceedings of the 3rd European Bois Noir Workshop, Barcelona, Spain.

Fahrentrapp J, Broggini GAL, Kellerhals M, Malnoy M, Peil A, Richter K, Gessler C (2012). “News of Malus x robusta candidate resistance gene“. Biotech Fruit II, Nelson. New Zealand, Presentation.

Fahrentrapp J, Broggini GAL, Malnoy M, Zini E, Peil A, Richter K, Kellerhals K and Gessler C (2011). “Looking into the Region of Resistance against Fire Blight of M. x robusta 5”. COST864 Final Meeting, Hasselt, Belgium, Presentation.

Fahrentrapp J, Broggini GAL, Kellerhals M, Malnoy M, Peil A, Richter K, Gessler C (2011). “A Candidate Gene of Malus x robusta 5 for Breeding Towards Fire Blight Resistance”, XIII EUCARPIA meeting on Fruit breeding and Genetics, September, 2011, Warsaw, Poland, Presentation.

Fahrentrapp J, Seibicke T, Kassemeyer HH (2010). “Characterization of the Necrosis Producing Protein NPPpv from Plasmopara viticola Belonging to the Nep1-like Protein Family (NLPs) and its Putative Role in the Host-Pathogen-Interaction”. 6th International Workshop of Grapevine Downy and Powdery Mildew, Bordeaux, France, ISBN 978-2-7380-1279-1.

Fahrentrapp J, Broggini GAL, Peil A, Malnoy M, Zini E, Kellerhals M, Gessler C (2010). “Fine Mapping of the Fire Blight Resistance Lcus in Malus robusta 5 on linkage group 3”. 12th International Workshop on Fire Blight, Warsaw, Poland, Presentation

Fahrentrapp J, Michl G, Breuer M (2008). “Establishing a Real Time PCR for the Detection of Common Types of Bois Noir Phytoplasmas.” 1st European Bois noir Workshop, Weinsberg, Germany, Poster.

Fahrentrapp J, Michl G, Breuer M (2008). “Re-Colonisation of Hyalesthes obsoletus in a Newly Terraced Vineyard.” 1st European Bois noir Workshop, Weinsberg, Germany, Presentation.

Breuer M, Fahrentrapp J, Michl G (2008). „Geographical Distribution of Bois Noir and Hyalesthes obsoletus in Baden (SW Germany)”. 1st European Bois noir Workshop, Weinsberg, Germany.