Moretti, Chiaraluce; Rezzonico, Fabio; Orfei, Benedetta; Cortese, Chiara; Moreno‐Pérez, Alba; van den Burg, Harrold A.; Onofri, Andrea; Firrao, Giuseppe; Ramos, Cayo; Smits, Theo H.M.; Buonaurio, Roberto,

2021.

Synergistic interaction between the type III secretion system of the endophytic bacterium Pantoea agglomerans DAPP‐PG 734 and the virulence of the causal agent of olive knot Pseudomonas savastanoi pv. savastanoi DAPP‐PG 722.

Molecular Plant Pathology.

Verfügbar unter: https://doi.org/10.1111/mpp.13105

Kałużna, Monika; Fischer‐Le Saux, Marion; Pothier, Joël; Jacques, Marie‐Agnès; Obradović, Aleksa; Tavares, Fernando; Stefani, Emilio,

2021.

Xanthomonas arboricola pv. juglandis and pv. corylina: Brothers or distant relatives? : genetic clues, epidemiology, and insights for disease management.

Molecular Plant Pathology.

Verfügbar unter: https://doi.org/10.1111/mpp.13073

Mainetti, Tamara; Palmisano, Marilena; Rezzonico, Fabio; Stres, Blaž; Kern, Susanne; Smits, Theo H. M.,

2021.

Broad diversity of bacteria degrading 17ß-estradiol-3-sulfate isolated from river sediment and biofilm at a wastewater treatment plant discharge.

Archives of Microbiology.

Verfügbar unter: https://doi.org/10.1007/s00203-021-02409-0

Cottyn, B.; De Paepe, B.; Dia, Nay; Van Malderghem, C.; Pothier, Joël; Van Vaerenbergh, J.,

2021.

First report of bacterial leaf spot of Hydrangea in retail nurseries in Belgium caused by strains assigned to a new Xanthomonas hortorum clade.

New Disease Reports.

43(2), S. e12008.

Verfügbar unter: https://doi.org/10.1002/ndr2.12008

Catara, Vittoria; Cubero, Jaime; Pothier, Joël; Bosis, Eran; Bragard, Claude; Đermić, Edyta; Holeva, Maria C.; Jacques, Marie-Agnès; Petter, Francoise; Pruvost, Olivier; Robène, Isabelle; Studholme, David J.; Tavares, Fernando; Vicente, Joana G.; Koebnik, Ralf; Costa, Joana,

2021.

Trends in molecular diagnosis and diversity studies for phytosanitary regulated Xanthomonas.

Microorganisms.

9(4), S. 862.

Verfügbar unter: https://doi.org/10.3390/microorganisms9040862

Fernandes, Camila; Martins, Leonor; Teixeira, Miguel; Blom, Jochen; Pothier, Joël; Fonseca, Nuno A.; Tavares, Fernando,

2021.

Comparative genomics of Xanthomonas euroxanthea and Xanthomonas arboricola pv. juglandis strains isolated from a single walnut host tree.

Microorganisms.

9(3), S. 624.

Verfügbar unter: https://doi.org/10.3390/microorganisms9030624

Doolotkeldieva, Tinatin; Bobushova, Saikal; Carnal, Simon; Rezzonico, Fabio,

2021.

Genetic characterization of Erwinia amylovora isolates detected in the wild walnut‑fruit forest of South Kyrgyzstan.

Journal of Plant Pathology.

103(Suppl 1), S. 109-120.

Verfügbar unter: https://doi.org/10.1007/s42161-021-00752-1

Schmautz, Zala; Espinal, Carlos A.; Smits, Theo H. M.; Frossard, Emmanuel; Junge, Ranka,

2021.

Nitrogen transformations across compartments of an aquaponic system.

Aquacultural Engineering.

92(102145).

Verfügbar unter: https://doi.org/10.1016/j.aquaeng.2021.102145

Schmautz, Zala; Espinal, Carlos A.; Bohny, Andrea M.; Rezzonico, Fabio; Junge, Ranka; Frossard, Emmanuel; Smits, Theo H. M.,

2021.

Environmental parameters and microbial community profiles as indication towards microbial activities and diversity in aquaponic system compartments.

BMC Microbiology.

21(12).

Verfügbar unter: https://doi.org/10.1186/s12866-020-02075-0

Puławska, Joanna; Kałużna, Monika; Warabieda, Wojciech; Pothier, Joël F.; Gétaz, Michael; van der Wolf, Jan M.,

2020.

Transcriptome analysis of Xanthomonas fragariae in strawberry leaves.

Scientific Reports.

10(20582).

Verfügbar unter: https://doi.org/10.1038/s41598-020-77612-y

Gaganidze, Dali; Sadunishvili, Tinatin; Aznarashvili, Mariam; Abashidze, Ekaterine; Gurielidze, Manana; Carnal, Simon; Rezzonico, Fabio; Zubadalashvili, Manana,

2020.

Fire blight distribution in Georgia and characterization of selected Erwinia amylovora isolates.

Journal of Plant Pathology.

103(Suppl 1), S. 121-129.

Verfügbar unter: https://doi.org/10.1007/s42161-020-00700-5

Murray, Alison E.; Freudenstein, John; Gribaldo, Simonetta; Hatzenpichler, Roland; Hugenholtz, Philip; Kämpfer, Peter; Konstantinidis, Konstantinos T.; Lane, Christopher E.; Papke, R. Thane; Parks, Donovan H.; Rossello-Mora, Ramon; Stott, Matthew B.; Sutcliffe, Iain C.; Thrash, J. Cameron; Venter, Stephanus N.; Whitman, William B.; Acinas, Silvia G.; Amann, Rudolf I.; Anantharaman, Karthik; Armengaud, Jean; Baker, Brett J.; Barco, Roman A.; Bode, Helge B.; Boyd, Eric S.; Brady, Carrie L.; Carini, Paul; Chain, Patrick S. G.; Colman, Daniel R.; DeAngelis, Kristen M.; de los Rios, Maria Asuncion; Estrada-de los Santos, Paulina; Dunlap, Christopher A.; Eisen, Jonathan A.; Emerson, David; Ettema, Thijs J. G.; Eveillard, Damien; Girguis, Peter R.; Hentschel, Ute; Hollibaugh, James T.; Hug, Laura A.; Inskeep, William P.; Ivanova, Elena P.; Klenk, Hans-Peter; Li, Wen-Jun; Lloyd, Karen G.; Löffler, Frank E.; Makhalanyane, Thulani P.; Moser, Duane P.; Nunoura, Takuro; Palmer, Marike; Parro, Victor; Pedrós-Alió, Carlos; Probst, Alexander J.; Smits, Theo; Steen, Andrew D.; Steenkamp, Emma T.; Spang, Anja; Stewart, Frank J.; Tiedje, James M.; Vandamme, Peter; Wagner, Michael; Wang, Feng-Ping; Yarza, Pablo; Hedlund, Brian P.; Reysenbach, Anna-Louise,

2020.

Author correction : roadmap for naming uncultivated archaea and bacteria.

Nature Microbiology.

6(1), S. 136.

Verfügbar unter: https://doi.org/10.1038/s41564-020-00827-2

Dia, Nay C.; Rezzonico, Fabio; Smits, Theo H. M.; Pothier, Joël F.,

2020.

Complete or high-quality draft genome sequences of six Xanthomonas hortorum strains sequenced with short- and long-read technologies.

Microbiology Resource Announcements.

9(41), S. e00828-20.

Verfügbar unter: https://doi.org/10.1128/MRA.00828-20

Martins, Leonor; Fernandes, Camila; Blom, Jochen; Dia, Nay C.; Pothier, Joël F.; Tavares, Fernando,

2020.

Xanthomonas euroxanthea sp. nov. : a new xanthomonad species including pathogenic and non-pathogenic strains of walnut.

International Journal of Systematic and Evolutionary Microbiology.

70(12), S. 6024-6031.

Verfügbar unter: https://doi.org/10.1099/ijsem.0.004386

Kaufmann, Moritz; Schüle, Martin; Smits, Theo; Pothier, Joël,

2020.

Typing plasmids with distributed sequence representation [Paper].

In:

Schilling, Frank-Peter; Stadelmann, Thilo, Hrsg.,

Artificial Neural Networks in Pattern Recognition.

9th IAPR TC 3 Workshop on Artificial Neural Networks for Pattern Recognition (ANNPR'20), Winterthur, Switzerland, 2-4 September 2020.

Cham:

Springer.

S. 200-210.

Lecture Notes in Computer Science ; 12294.

Verfügbar unter: https://doi.org/10.1007/978-3-030-58309-5_16

Gétaz, Michael; Puławska, Joanna; Smits, Theo H.M.; Pothier, Joël F.,

2020.

Host–pathogen interactions between Xanthomonas fragariae and its host Fragaria × ananassa investigated with a dual RNA-Seq analysis.

Microorganisms.

8(8), S. 1253.

Verfügbar unter: https://doi.org/10.3390/microorganisms8081253

Gétaz, Michael; Blom, Jochen; Smits, Theo H. M.; Pothier, Joël F.,

2020.

Comparative genomics of Xanthomonas fragariae and Xanthomonas arboricola pv. fragariae reveals intra- and interspecies variations.

Phytopathology Research.

2020(2), S. 17.

Verfügbar unter: https://doi.org/10.1186/s42483-020-00061-y

Escursell, Mireia Marcé; Roschi, Alexia; Smits, Theo; Rezzonico, Fabio,

2020.

Characterization and direct molecular discrimination of rpsL mutations leading to high streptomycin resistance in Erwinia amylovora.

Journal of Plant Pathology.

103(Suppl 1), S. 99-108.

Verfügbar unter: https://doi.org/10.1007/s42161-020-00600-8

Murray, Alison E.; Freudenstein, John; Gribaldo, Simonetta; Hatzenpichler, Roland; Hugenholtz, Philip; Kämpfer, Peter; Konstantinidis, Konstantinos T.; Lane, Christopher E.; Papke, R. Thane; Parks, Donovan H.; Rossello-Mora, Ramon; Stott, Matthew B.; Sutcliffe, Iain C.; Thrash, J. Cameron; Venter, Stephanus N.; Whitman, William B.; Acinas, Silvia G.; Amann, Rudolf I.; Anantharaman, Karthik; Armengaud, Jean; Baker, Brett J.; Barco, Roman A.; Bode, Helge B.; Boyd, Eric S.; Brady, Carrie L.; Carini, Paul; Chain, Patrick S. G.; Colman, Daniel R.; DeAngelis, Kristen M.; de los Rios, Maria Asuncion; Estrada-de los Santos, Paulina; Dunlap, Christopher A.; Eisen, Jonathan A.; Emerson, David; Ettema, Thijs J. G.; Eveillard, Damien; Girguis, Peter R.; Hentschel, Ute; Hollibaugh, James T.; Hug, Laura A.; Inskeep, William P.; Ivanova, Elena P.; Klenk, Hans-Peter; Li, Wen-Jun; Lloyd, Karen G.; Löffler, Frank E.; Makhalanyane, Thulani P.; Moser, Duane P.; Nunoura, Takuro; Palmer, Marike; Parro, Victor; Pedrós-Alió, Carlos; Probst, Alexander J.; Smits, Theo H.M.; Steen, Andrew D.; Steenkamp, Emma T.; Spang, Anja; Stewart, Frank J.; Tiedje, James M.; Vandamme, Peter; Wagner, Michael; Wang, Feng-Ping; Hedlund, Brian P.; Reysenbach, Anna-Louise,

2020.

Roadmap for naming uncultivated archaea and bacteria.

Nature Microbiology.

5, S. 987-994.

Verfügbar unter: https://doi.org/10.1038/s41564-020-0733-x

Rothen, Julian; Sapugahawatte, Dulmini Nanayakkara; Li, Carmen; Lo, Norman; Vogel, Guido; Foucault, Frédéric; Pflüger, Valentin; Pothier, Joël; Blom, Jochen; Daubenberger, Claudia; Ip, Margaret,

2020.

A simple, rapid typing method for Streptococcus agalactiae based on ribosomal subunit proteins by MALDI-TOF MS.

Scientific Reports.

10(8788).

Verfügbar unter: https://doi.org/10.1038/s41598-020-65707-5